Syntheses and Structures of Two Zn-Pyrazole/carboxyl Coordination Frameworks

Chen-Hao OU YANG Zi-Juan WEI Liang HE Yu-Jun GUO Ming-Bu LUO Qi-Pu LIN

Citation:  Chen-Hao OU YANG, Zi-Juan WEI, Liang HE, Yu-Jun GUO, Ming-Bu LUO, Qi-Pu LIN. Syntheses and Structures of Two Zn-Pyrazole/carboxyl Coordination Frameworks[J]. Chinese Journal of Structural Chemistry, 2021, 40(10): 1265-1270. doi: 10.14102/j.cnki.0254–5861.2011–3149 shu

Syntheses and Structures of Two Zn-Pyrazole/carboxyl Coordination Frameworks

English

  • Metal-organic frameworks (MOFs) are microporous or even mesoporous crystalline materials constructed by the assembly of metal cations and organic linkers. As a new type of porous materials, MOFs have been at the cutting edge of research for the past few decades[1]. Except for their captivating structures[2], the enchanting properties of MOFs export diverse potential applications, including gas storage[3], gas separation[4], catalysis[5], nonlinear optical devices[6], magnetism[7], chemical sensor[8] and drug delivery[9].

    Pyrazole and its derivatives of heterocyclic molecules have been widely used in coordination chemistry, optical brighteners, ultraviolet stabilizers and photoinduced electron transfer systems[10]. Among them, 1H-pyrazole-3, 5-dicarboxylic acid (PDC) is a suitable ligand for constructing MOFs because of a large number of N or O coordination sites and rich coordination patterns. Complexes based on PDC with alkaline, transition and lanthanide metals have been reported[11]. Lately, hybrid ligands are used to build MOFs with novel structures and unique properties. Herein, we choose PDC and BDC (benzene-1, 4, -dicarboxylic acid) or BPY (4, 4-bipyridine) as ligands to fabricate two structures [(Zn4(PDC)2(BDC)(H2O)2]n and [(Zn3(PDC)2(BPY)3(H2O)2]n, which show interesting fluorescent performance.

    All chemicals were obtained from commercial sources and used without further purification. Elemental analyses (EA) for C, H, and N were carried out on a German Elementary Vario EL III instrument. Infrared (IR) spectra (KBr pellets) were recorded on a Nicolet Magna 750 FT-IR spectrometer in the range of 500~4000 cm-1. Powder X-ray diffraction (PXRD) data were recorded on a Rigaku MiniFlex II using Cu radiation and diffractometer at a scan speed of 5 º·min-1. Thermogravimetric analyses (TGA) data were investigated on a NETSCHZ STA-449C thermoanalyzer under N2 (range, 0~1200 ºC) at a heating rate of 10 ºC·min-1.

    1 (Zn-PDCBDC): A mixture of ZnSO4·4H2O (119 mg, 0.4 mmol), PDC (35 mg, 0.2 mmol), BDC (50 mg, 0.3 mmol) and KOH (16 mg, 0.4 mmol) was dissolved in water (10 mL), and then transferred into a 25 mL Teflon-lined stainless-steel vessel, followed by heating to 150 ºC for 112 h. After cooling down to room temperature, colorless cylindrical crystals were harvested with the yield of 23% based on PDC. FT-IR (4000~450 cm-1): 3385 (s), 1677 (s), 1595 (s), 1509 (m), 1425 (m), 1345 (s), 1287 (s), 1220 (w), 1136 (w), 1113 (w), 1019 (w), 940 (w), 841 (w), 782 (m), 773 (m). EA calcd. (C18H16N4O17Zn4): C, 26.31; H, 1.96; N, 6.82%. Found: C, 26.33; H, 2.01; N, 6.80%. The slight discrepancy between measured and calculated EA values could be caused by the volatility of guest solvents.

    2 (Zn-PDCBPY): A mixture of ZnSO4·7H2O (115 mg, 0.4 mmol), PDC (35 mg, 0.2 mmol), BPY (47 mg, 0.3 mmol) and NaOH (16 mg, 0.4 mmol) was dissolved in water (10 mL). Then the mixture was transferred into a 25 mL Teflon-lined stainless-steel vessel, heated to 160 ºC in 3 h and kept at constant temperature for 72 h. After cooling down to room temperature, colorless cylindrical crystals were obtained with the yield of 70% based on PDC. FT-IR (4000~450 cm-1): 3399 (s), 1606 (s), 1494 (w), 1455 (w), 1412 (w), 1357 (m), 1305 (m), 1224 (w), 1073 (w), 1053 (w), 835 (w), 808 (w), 777 (w). EA calcd. (C40H30N10O10Zn3): C, 47.72; H, 3.00; N, 13.91%. Found: C, 47.76; H, 2.93; N, 13.93%. The slight discrepancy between measured and calculated EA values could be caused by the volatility of guest solvents.

    Crystals of compounds 1 and 2 were selected and attached to a glass fiber. Single-crystal X-ray diffraction (SCXRD) data were collected on a MM007 CCD diffractometer equipped with graphite-monochromatic Mo radiation (λ = 0.71073 Å) at 293 K. For compound 1, a total of 17226 reflections were collected in the range of 2.38≤θ≤27.48º by using an ω-scan mode, of which 5150 were unique with Rint = 0.0255. The final R = 0.0218, wR = 0.0686 (w = 1/[σ2(Fo2) + (0.0333P)2 + 0.0412P], where P = (Fo2 + 2Fc2)/3), S = 1.163, (Δ/σ)max = 0.001, (Δρ)max = 0.38 and (Δρ)min = –0.36 e·Å-3. For compound 2, a total of 7961 reflections were collected in the range of 2.22≤θ≤27.48º by using an ω-scan mode, of which 2450 were unique with Rint = 0.0213. The final R = 0.0320, wR = 0.0768 (w = 1/[σ2(Fo2) + (0.0333P)2 + 0.0412P], where P = (Fo2 + 2Fc2)/3), S = 1.084, (Δ/σ)max = 0.000, (Δρ)max = 0.43 and (Δρ)min = –0.33 e·Å-3.

    The structures were solved by direct methods with SHELXS and refined by full-matrix least-squares methods with SHELXL (embedded in OLEX2.0) program package[12]. Non-hydrogen atoms were located with successive difference Fourier technique and refined anisotropically, while hydrogen atoms were added in the idealized positions. Selected bond lengths and bond angles of compounds 1 and 2 from SCXRD are listed in Tables 1 and 2.

    Table 1

    Table 1.  Selected Bond Lengths (Å) and Bond Angles (°) of Compound 1
    DownLoad: CSV
    Bond Dist. Bond Dist. Bond Dist.
    Zn(1)–O(1)W 2.011(3) Zn(1)–O(1) 2.142(2) Zn(1)–O(7)1 2.047(2)
    Zn(1)–O(10)2 2.128(2) Zn(2)–O(8)4 2.111(2) Zn(2)–O(9)2 1.992(2)
    Zn(2)–O(1) 1.942(2) Zn(2)–O(3)3 2.335(2) Zn(2)–N(2)3 1.974(3)
    Angle (°) Angle (°) Angle (°)
    O(1)W–Zn(1)–O(1) 98.20(10) O(7)1–Zn(1)–O(10)2 92.13(9) N(1)–Zn(1)–O(10)2 163.02(10)
    O(1)W–Zn(1)–O(7)1 98.60(10) O(7)1–Zn(1)–O(12) 84.22(9) N(1)–Zn(1)–O(12) 88.97(9)
    O(1)W–Zn(1)–O(10)2 88.45(11) O(7)1–Zn(1)–N(1) 100.58(9) O(1)–Zn(2)–O(3)3 89.63(9)
    O(1)W–Zn(1)–N(1) 100.59(11) O(10)2–Zn(1)–O(1) 88.17(9) O(1)–Zn(2)–O(8)4 97.92(9)
    O(1)–Zn(1)–O(12) 79.24(9) O(10)2–Zn(1)–O(12) 81.10(9) O(1)–Zn(2)–O(9)2 104.94(10)
    O(7)1–Zn(1)–O(1) 163.20(9) N(1)–Zn(1)–O(1) 76.40(9) O(1)–Zn(2)–N(2)3 136.44(11)
    Symmetry transformation: 1: 1/2 + x, 1/2 – y, z; 2: 1/2 – x, –1/2 + y, –1/2 + z; 3: –1/2 + x, 3/2 – y, z; 4: x, 1 + y, z;

    Table 2

    Table 2.  Selected Bond Lengths (Å) and Bond Angles (°) of Compound 2
    DownLoad: CSV
    Bond Dist. Bond Dist. Bond Dist.
    Zn(1)–O(1)W 2.045(2) Zn(1)–N(3)2 2.2572(19) Zn(2)–N(2) 2.080(2)
    Zn(1)–O(2)1 2.0477(19) Zn(1)–N(3) 2.2572(19) Zn(2)–N(2)3 2.080(2)
    Zn(1)–O(2) 2.2017(19) Zn(2)–O(4)3 2.1404(19) Zn(2)–N(4)3 2.260(2)
    Zn(1)–N(1) 2.038(2) Zn(2)–O(4) 2.1404(19) Zn(2)–N(4) 2.260(2)
    Angle (°) Angle (°) Angle (°)
    O(1)W–Zn(1)–O(2) 166.35(8) O(2)2–Zn(1)–O(2) 74.53(8) N(1)–Zn(1)–O(1)W 118.30(9)
    O(1)W–Zn(1)–N(3) 87.80(5) O(2)–Zn(1)–N(3) 92.50(5) N(1)–Zn(1)–O(2) 75.35(8)
    O(1)W–Zn(1)–N(3)1 87.80(4) O(2)–Zn(1)–N(3)1 92.50(5) N(1)–Zn(1)–O(2)2 149.88(8)
    O(2)2–Zn(1)–O(1)W 91.82(8) O(2)2–Zn(1)–N(3) 91.58(5) N(1)–Zn(1)–N(3)1 89.72(4)
    N(3)1–Zn(1)–N(3) 174.66(9) O(2)2–Zn(1)–N(3)1 91.58(4) N(1)–Zn(1)–N(3) 89.72(4)
    Symmetry transformation: 1: x, 1 – y, z; 2: 1 – x, 1 – y, 2 – z; 3: 1 – x, 1 – y, 1 – z;

    SCXRD studies demonstrate that compound 1 crystallizes in orthorhombic space group Pna21 and consists of BDC-pillared Zn-PDC layers (Fig. 1). The asymmetrical unit of the framework includes four Zn2+ ions, two water molecules, and two PDC3- and one BDC2- ligands. Two hexahedrally coordinated Zn2+ centers are ligated by a N-C-C-O moiety from a PDC3- and further bonded with one carboxyl O-atom from another PDC3-, two carboxyl O-atoms from different BDC2-, and one H2O molecule. Another two Zn2+ centers are in a distorted square pyramidal coordination geometry, surrounded by a N-C-C-O moiety from a PDC3-, two carboxyl O-atoms from another two different PDC3-, and one carboxyl O-atom from BDC2-. Four Zn2+ centers are linked by four μ2-O atoms from four different PDC3- ligands to form a tetrameric ring {Zn4O4}, which are connected with each other by PDC3- spacers to form a 2D layer. If serving the {Zn4O4} ring as a node, the {Zn-PDC} layer could be viewed as a (4, 4) grid. Such 2D {Zn-PDC} layers are further pillared by the secondary ligand of BDC2- to form a 3D structure, which adopts a 6-connected rob topology with its Schläfli symbol of {4^8;6^6;8}. All the Zn–O bond lengths fall in the range from 1.942(2) to 2.457(2) Å, and the lengths of Zn–N are between 1.970(3) and 2.069(3) Å.

    Figure 1

    Figure 1.  a) Coordination environments of zinc atoms of compound 1, b) 2D {Zn-PDC} sheet, which is further linked by BDC to form c) 3D framework, and its d) topological net of compound 1

    Based on SCXRD analysis, compound 2 crystallizes in the monoclinic space group C2/c. As shown in Fig. 2, 2 contains two crystallographically independent Zn2+ ions, of which one is equatorially ligated by two N-C-C-O moieties from two PDC3- and axially bonded with two pyridine groups of BPY, and the other is coordinated by two carboxyl O-atoms from two different PDC3-, one N-atom of PDC3-, one H2O molecule and two pyridyl groups from BPY. Ligands of PDC are fully-deprotonated during the self-assembly process. Two six-coordinated Zn2+ centers are linked by two μ2-O atoms from two different PDC3- ligands to form dimers which are connected with each other by PDC3- spacers to form a 1D wave-like chain. Such chains are further linked by the neutral ligand of BPY to form a 2D structure packed in an ABAB fashion. All the Zn–O bond lengths fall in the range of 2.045(2)~2.201(19) Å, and the lengths of Zn–N are between 2.038(2) and 2.260(2) Å.

    Figure 2

    Figure 2.  a) Coordination environments of zinc atoms of compound 2, b) 2D layer built of 1D {Zn-PDC} chains and BPY pillars

    The phase purity of the crystalline products was determined by PXRD, which shows that the experimental PXRD patterns are nearly the same as the simulated ones from SCXRD data (Fig. 3), implying that compounds 1 and 2 are both pure. The TGA curves of 1 and 2 are quite similar, which show weight loss below 125 ºC under N2 atmosphere, suggesting that the low-boiling water molecules could be evacuated at this temperature (Fig. 4). No obvious weight loss between 125 and 280 ºC was observed, indicating the samples of 1 and 2 are fairly thermally stable. The two IR spectra are similar near the 1650 and 1350 cm-1, which confirms the expectation that -COOH and C-N exist on the IR spectrum in this frequency range (Fig. 5).

    Figure 3

    Figure 3.  PXRD patterns of compounds a) 1 and b) 2

    Figure 4

    Figure 4.  TGA curves of compounds a) 1 and b) 2

    Figure 5

    Figure 5.  IR spectra of compounds a) 1 and b) 2

    The fluorescence spectra of compounds 1 and 2 give the typical broad peaks mainly due to the π-π* transition of the heterocyclic ligands of PDC (Fig. 6). According to the just published work[13], the emission single peak of 1 at 414 nm is attributed to the ligand PDC. Differently, compound 2 displays bimodal excitation and emission features, which could be on account of the existence of double heterocyclic ligands (PDC and BPY). The emission peak at 396 nm of 2 could be assigned to the ligand PDC (inset of Fig. 6). Because the pyridine of BPY has better charge transfer ability than the carboxyl group of BDC, compound 2 has another two emission peaks at 455 and 480 nm under excitation of 346 nm. Such fluorescence behavior is mainly caused by the synergistic effect of different ligands, which is of great significance for the study of fluorescent mixed-ligand MOFs.

    Figure 6

    Figure 6.  Fluorescence excitation and emission spectra of compounds a) 1 and b) 2

    In conclusion, two zinc MOFs of [(Zn4(PDC)2(BDC)(H2O)2]n (1) and [Zn3(PDC)2(BPY)3(H2O)2]n (2), prepared under hydrothermal conditions, were constructed by Zn2+, pyrazole/carboxyl merged ligand of PDC, and a secondary linker (BDC and BPY for 1 and 2, respectively). The structures of compounds 1 and 2 were fully analyzed. Among them, compound 1 is a 3D 6-connected rob-type framework, while 2 is just a 2D structure. However, due to the different charge transfer capacity of the secondary ligands, two compounds showed significant differences in their fluorescence spectra.


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  • Figure 1  a) Coordination environments of zinc atoms of compound 1, b) 2D {Zn-PDC} sheet, which is further linked by BDC to form c) 3D framework, and its d) topological net of compound 1

    Figure 2  a) Coordination environments of zinc atoms of compound 2, b) 2D layer built of 1D {Zn-PDC} chains and BPY pillars

    Figure 3  PXRD patterns of compounds a) 1 and b) 2

    Figure 4  TGA curves of compounds a) 1 and b) 2

    Figure 5  IR spectra of compounds a) 1 and b) 2

    Figure 6  Fluorescence excitation and emission spectra of compounds a) 1 and b) 2

    Table 1.  Selected Bond Lengths (Å) and Bond Angles (°) of Compound 1

    Bond Dist. Bond Dist. Bond Dist.
    Zn(1)–O(1)W 2.011(3) Zn(1)–O(1) 2.142(2) Zn(1)–O(7)1 2.047(2)
    Zn(1)–O(10)2 2.128(2) Zn(2)–O(8)4 2.111(2) Zn(2)–O(9)2 1.992(2)
    Zn(2)–O(1) 1.942(2) Zn(2)–O(3)3 2.335(2) Zn(2)–N(2)3 1.974(3)
    Angle (°) Angle (°) Angle (°)
    O(1)W–Zn(1)–O(1) 98.20(10) O(7)1–Zn(1)–O(10)2 92.13(9) N(1)–Zn(1)–O(10)2 163.02(10)
    O(1)W–Zn(1)–O(7)1 98.60(10) O(7)1–Zn(1)–O(12) 84.22(9) N(1)–Zn(1)–O(12) 88.97(9)
    O(1)W–Zn(1)–O(10)2 88.45(11) O(7)1–Zn(1)–N(1) 100.58(9) O(1)–Zn(2)–O(3)3 89.63(9)
    O(1)W–Zn(1)–N(1) 100.59(11) O(10)2–Zn(1)–O(1) 88.17(9) O(1)–Zn(2)–O(8)4 97.92(9)
    O(1)–Zn(1)–O(12) 79.24(9) O(10)2–Zn(1)–O(12) 81.10(9) O(1)–Zn(2)–O(9)2 104.94(10)
    O(7)1–Zn(1)–O(1) 163.20(9) N(1)–Zn(1)–O(1) 76.40(9) O(1)–Zn(2)–N(2)3 136.44(11)
    Symmetry transformation: 1: 1/2 + x, 1/2 – y, z; 2: 1/2 – x, –1/2 + y, –1/2 + z; 3: –1/2 + x, 3/2 – y, z; 4: x, 1 + y, z;
    下载: 导出CSV

    Table 2.  Selected Bond Lengths (Å) and Bond Angles (°) of Compound 2

    Bond Dist. Bond Dist. Bond Dist.
    Zn(1)–O(1)W 2.045(2) Zn(1)–N(3)2 2.2572(19) Zn(2)–N(2) 2.080(2)
    Zn(1)–O(2)1 2.0477(19) Zn(1)–N(3) 2.2572(19) Zn(2)–N(2)3 2.080(2)
    Zn(1)–O(2) 2.2017(19) Zn(2)–O(4)3 2.1404(19) Zn(2)–N(4)3 2.260(2)
    Zn(1)–N(1) 2.038(2) Zn(2)–O(4) 2.1404(19) Zn(2)–N(4) 2.260(2)
    Angle (°) Angle (°) Angle (°)
    O(1)W–Zn(1)–O(2) 166.35(8) O(2)2–Zn(1)–O(2) 74.53(8) N(1)–Zn(1)–O(1)W 118.30(9)
    O(1)W–Zn(1)–N(3) 87.80(5) O(2)–Zn(1)–N(3) 92.50(5) N(1)–Zn(1)–O(2) 75.35(8)
    O(1)W–Zn(1)–N(3)1 87.80(4) O(2)–Zn(1)–N(3)1 92.50(5) N(1)–Zn(1)–O(2)2 149.88(8)
    O(2)2–Zn(1)–O(1)W 91.82(8) O(2)2–Zn(1)–N(3) 91.58(5) N(1)–Zn(1)–N(3)1 89.72(4)
    N(3)1–Zn(1)–N(3) 174.66(9) O(2)2–Zn(1)–N(3)1 91.58(4) N(1)–Zn(1)–N(3) 89.72(4)
    Symmetry transformation: 1: x, 1 – y, z; 2: 1 – x, 1 – y, 2 – z; 3: 1 – x, 1 – y, 1 – z;
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  • 发布日期:  2021-10-01
  • 收稿日期:  2021-02-22
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