Micro-vial Synthesis, Structure, Magnetic Properties and Hirshfeld Surface Analysis of a Penta-nuclear Fe(III) Cluster
English
Micro-vial Synthesis, Structure, Magnetic Properties and Hirshfeld Surface Analysis of a Penta-nuclear Fe(III) Cluster
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1. INTRODUCTION
In the last year, Okamura et al. reported a pentanuclear iron cluster which can be catalyst water oxidation[1]. Polynuclear iron(III) clusters continue to attract the intense interest of many inorganic groups[2-4]. In the molecular magnet system, high-spin FeIII ions have a large number of unpaired electrons (3d5, S = 5/2) and usually display strong antiferromagnetic interactions among FeIII ions[5, 6], but part of high nuclearity iron(III) clusters which possess appropriate topologies and large spin (S) values in their ground states can even occasionally function as single-molecule magnets (SMMs)[7, 8].
Careful selection of appropriate organic ligand with certain characteristics, such as variable bonding modes and the ability to perform supramolecular interactions, is helpful for tailoring and constructing clusters with desirable properties[9-13]. In recent years, many complexes constructed with 5-amino-1, 2, 3, 4-tetrazole (HATZ) have been reported[14-19]. From the structural point of view, HATZ possesses two interesting characteristics: (1) the ATZ possesses four N atoms of tetrazole group and one amino group with two hydrogen atoms and might be utilized as versatile linker in constructing interesting coordination polymers with abundant hydrogen bonds[5, 14-19]. (2) HATZ shows abundant coordination modes (Scheme 1), such as μ2: 1η1: 4η1[14], μ3: 1η1: 2η1: 4η1[15], μ1: 1η1[16], μ3: 1η1: 2η1: 3η1: 4η1[17], μ2: 2η1: 3η1[18] and μ3: 1η1: 2η1: 3η1[19]. But the complexes of HATZ Schiff base are rarely reported[5]. Herein, using a new Schiff base H2timb synthesized by 5-bromo-2-hydroxybenzaldehyde and HATZ, a pentanuclear iron(III) cluster [HN(C2H5)3]· [Fe5(timb)4(ATZ)4(μ3-O)2]·(H2O)5 (1) was synthesized through micro-vial reactions.
Scheme 1
2. EXPERIMENTAL
2.1 Synthesis of H2timb
A mixture of 5-bromo-2-hydroxybenzaldehyde (20 mmol, 4.021 g), HATZ (20 mmol, 1.701 g) and EtOH (30 mL) in a 100 mL flask was refluxed at 80 ℃ for 2 h, and then dried at 50 ℃ for 24 h after filtrated, yellow-greenish powder had been gained (yield: 3.706 g, ca. 98%, based on HATZ). Anal. Calcd. for H2timb: C8H6N5OBr (Mr = 268.09), Calcd.: C, 35.81; H, 2.34; N, 26.11%. Found: C, 35.78; H, 2.38; N, 26.14%. IR data (KBr, cm–1, Fig. S1): 3379w, 1613s, 1555s, 1470s, 1274s, 1174s, 1063m, 728m.
2.2 Synthesis of 1
A mixture of FeCl3·6H2O (0.5 mmol, 0.135 g), H2timb (0.5 mmol, 0.134 g) and anhydrous acetonitrile (10 mL) with a pH adjusted to 7 by addition of triethylamine was stirred for 15 min at room temperature. The mixture was poured into a micro-vial (20 mL) and then heated at 80 ℃ for 72 h. Bright black cuboid crystals of 1 were collected by filtration, washed with anhydrous acetonitrile (5 mL × 3) and dried in air (yield: 0.152 g, ca. 88.74% based on FeIII). Anal. Calcd. for 1: C42H50Br4Fe5N41O11 (Mr = 1904.04): C, 26.49; H, 2.65; N, 30.15%. Found: C, 26.35; H, 2.74; N, 30.22. IR data for 1 (KBr, cm–1, Fig. S1): 3357m, 1601s, 1574w, 1444s, 1299s, 1178s, 829w, 586m.
2.3 Crystal structure determination
The diffraction data were collected on an Agilent G8910A CCD diffractometer with graphite monochromatic Mo-Kα radiation (λ= 0.71073 Å) using an ω-θ scan mode in the range 3.74≤θ≤25.10°. Raw frame data were integrated with the SAINT program[20]. The structure of 1 was solved by direct methods using SHELXS-97 and refined by full-matrix least-squares on F2 using SHELXS-97[20]. An empirical absorption correction was applied with the program SADABS[20]. All non-hydrogen atoms were refined anisotropically. All hydrogen atoms were positioned geometrically and refined as riding. Calculations and graphics were performed with SHELXTL[20]. Disordered solvent molecules are removed by squeeze program. The solvent molecules and countervailing cations were determined by elemental and thermogravimetric analyses. Selected bond lengths and bond angles for 1 are listed in Table 1, and hydrogen bond lengths and bond angles in Table 2.
Table 1
Bond Dist. Bond Dist. Bond Dist. Fe(1)–O(1) 1.919(3) Fe(2)–O(1)i 1.880(6) Fe(1)–N(6) 2.078(6) Fe(1)–O(2) 1.907(5) Fe(2)–O(1) 1.880(6) Fe(1)–N(7)iii 2.145(6) Fe(1)–N(1) 2.191(6) Fe(2)–N(2) 2.113(6) Fe(2)–N(2)ii 2.113(6) Fe(2)–N(2)iii 2.113(6) Angle (°) Angle (°) Angle (°) O(1)–Fe(1)–N(1) 99.70(18) O(1)–Fe(2)–N(2)ii 86.48(14) N(7)iii–Fe(1)–N(1) 87.0(2) O(1)–Fe(1)–N(3)i 82.99(19) O(1)–Fe(2)–N(2) 93.52(14) N(7)iii–Fe(1)–N(3)i 165.6(2) O(1)–Fe(1)–N(6) 85.0(2) O(1)–Fe(2)–N(2)i 93.52(14) O(2)–Fe(1)–N(1) 172.9(2) O(1)–Fe(1)–N(7)iii 83.6(2) O(1)–Fe(2)–N(2)iii 93.52(14) O(2)–Fe(1)–N(3)i 96.4(2) O(2)–Fe(1)–O(1) 174.68(18) N(2)i–Fe(2)–N(2)iii 90.216(18) O(2)–Fe(1)–N(6) 89.8(2) N(6)–Fe(1)–N(1) 172.9(2) O(1)i–Fe(2)–O(1) 180.0 O(2)–Fe(1)–N(7)iii 97.4(2) N(6)–Fe(1)–N(3)i 95.8(2) O(1)–Fe(2)–N(2)i 86.48(14) O(1)i–Fe(2)–N(2) 86.48(14) N(2)iii–Fe(2)–N(2) 173.0(3) N(2)ii–Fe(2)–N(2)i 173.0(3) O(1)i–Fe(2)–N(2)ii 93.52(14) N(2)i–Fe(2)–N(2) 90.217(18) O(1)i–Fe(2)–N(2)iii 86.48(14) Symmetry transformation: (i) y, –x+1, –z; (ii) –y+1, x, –z; (iii) –x+1, –y+1, z Table 2
D–H···A d(D–H) d(H···A) d(D···A) ∠DHA N(10)–H(10A)···N(5)iv 0.8600 2.4300 2.9126 116.00 N(10)–H(10B)···O(2) 0.8600 2.3800 3.0351 133.00 N(10)–H(10B···N(4)iv 0.8600 2.4200 2.9320 119.00 C(2)–H(2)···N(5) 0.9300 2.3300 2.7485 107.00 N(9)–H(9)···Br(1)v 0.86 2.80 3.516 141.6 N(10)–H(10A)···Br(1)v 0.86 2.95 3.672 142.9 Symmetry codes: (iv) –y+0.5, −x, z−1/4; (v) 0.5−y, x−0.5, 0.5–z 2.4 Hirshfeld surface calculations of 1
Molecular Hirshfeld surface calculations were performed by using the CrystalExplorer program[21]. When the CIFs file of 1 are read into the CrystalExplorer program, all hydrogen bond lengths were automatically modified to typical standard neutron values (C–H = 1.083 Å, N–H = 1.009 Å and O–H = 0.983 Å)[22]. In this study, all the Hirshfeld surfaces were generated using a high (standard) surface resolution. The 3D dnorm surfaces were mapped by using a fixed color scale of 0.76 (red) to 2.4 (blue). The 2D fingerprint plots were displayed by using the standard 0.4~3.0 Å view with the de and di distance scales displayed on the graph axes.
3. RESULTS AND DISCUSSION
3.1 Description of the crystal structure
Single-crystal X-ray structure analysis reveals that 1 crystallizes in tetragonal system space group I
$ \bar 4 $ 2d with 42 axes. As illustrated in Fig. 1, 1 consists of one pentanuclear anionic FeIII cluster, [Fe5(timb)4(ATZ)4(μ3-O)2]–. It can also be seen that Fe(2) atom is located at the center of structure bridged by two μ3-O2‒ groups which are linked with the other four Fe atoms (Fe(1), its three centrosymmetric equivalent Fe atoms, Fe(1)a, Fe(1)b, and Fe(1)c, symmetry codes: (a) y, 1–x, –z; (b) 1–x, 1–y, z; (c) 1–y, x, –z). The five FeIII atoms formed two isosceles triangles perpendicular to each other sharing one vertex (plane equation of Fe(1)– Fe(2)–Fe(1)b: 18.183x + 7.673y = 12.9276, Fe(1)a– Fe(2)–Fe(1)c: –7.673x + 18.183y = 5.2553). Dihedral angle between the two planes is 90.0º which is perpendicular to each other. The Fe···Fe distance of 1 falls in the range of 3.291~3.305 Å, obviously shorter than that of [Fe5(μ3-F)2(XDK)2(L)4(O2CPh)4] (H2XDK = m-xylylenediamine bis(Kemp's triacid)-imide, L = pyridine(py) or N-methylimidazole-(N–MeIm). The Fe···Fe distances are in range of 3.452~3.585 Å)[23]. The magnetic exchange angles of Fe–O–Fe are in the range of 118.1~120.9°. The coordination geometry of the central iron Fe(2) ion can be described as a slightly distorted octahedron with the bond lengths of 1.880(4)~2.113(4) Å and the cis-angles in the range of 86.5(1)°~93.5(1)°, whereas the trans-angles vary from 173.0(2) to 180.0°. The other iron ions (Fe(1), Fe(1)a, Fe(1)b, and Fe(1)c) adopt a FeN4O2 configuration coordinated by two ATZ ligands, two timb ligands and one μ3-O2‒ group. The Fe(1) ion is found in more distorted octahedral geometry (cis-angles range from 83.0(1) to 99.7(1)°, and trans-angles from 165.6(2) to 174.7(1)°) with the axial bond elongated. The coordination bond lengths around the Fe(1) ion are in the range of 1.907(3)~2.191(5) Å. These bond lengths are consistent with those found in comparable structures (Fe–X (X = N, O) distances range from 1.869 to 2.225 Å)[23-25]. It is very interesting that the timb ligand displays a μ3: η1: η1: η1: η1 coordination mode while the ATZ ligand displays a μ2: 1η1: 2η1 coordination mode (Scheme 1g). This coordination pattern is easy to form clusters which are different from the coordination mode of Scheme 1a, 1b, 1d~1f. Those coordination patterns of Scheme 1a, 1b, 1d~1f are easy to form polymers[14, 15, 17-19]. At the same time, it must be noted that the ATZ ligand was synthesized though H2timb Schiff base decomposition reaction.Figure 1
Complex 1 further constructed a 1D chain through double receptor N···H–N hydrogen bonds (N(4)a···H(10a)i–N(10)i, 2.931 Å, N(5a)···H(10b)i–N(10)i, 2.913 Å symmetry code: (i) x, 0.5–y, 0.25–z) and double donor N– H···N hydrogen bonds (N(10)– H(10a)ii···N(4)ii, 2.931 Å, N(10)–H(10b)ii···N(5)ii, 2.913 Å symmetry code: (ii) y, x–0.5, 0.25+z. Fig. S2) which further formed a 3D network through abundant hydrogen bonds: N–H···N, N–H···Br (N(9)–H(9)···Br(1)iii, 3.516Å, N(10)– H(10a)···Br(1)iii, 3.672 Å, symmetry code: (iii) 0.5–y, x–0.5, 0.5–z), π···π interactions (the distance between the plane of C(3)~C(8) and the plane of (C(3)~C(8))iv is 3.457 Å, symmetry code: (iv) x, 0.5–y, 0.25–z), N–H···O and C–H···N (Table 2, Fig. S3)[26, 27].
3.2 Magnetic properties
The magnetic susceptibilities of 1 were measured by using crushed single crystal samples. The dc susceptibilities of 1 were measured under an applied field of 1 kOe at temperature ranging from 2 to 300 K.
For complex 1, the five Fe(III) ions give rise to the χmT product of 6.53 cm3·K·mol–1 at room temperature (Fig. 2). The χmT values at room temperature are all much less than the spin-only value of 22 cm3·K·mol–1 for five non-interacting high-spin FeIII ions assuming g = 2.2[25]. The observed values of 1 are also lesser than those obtained for [Fe5(μ3-F)2(XDK)2(py)4(O2CPh)4] (~10.98 cm3·K·mol–1) and [Fe5(μ3-F)2(XDK)2(N-MeIm)4(O2CPh)4] (~10.38 cm3·K·mol–1)[23]. Upon decreasing T, the χmT values of 1 gradually decrease to the minimum of 2.57 at 2 K. Similar magnetic behaviors were observed for [Fe5(μ3-F)2(XDK)2(py)4(O2CPh)4] and [Fe5(μ3-F)2(XDK)2 (N-MeIm)4(O2CPh)4][23]. The results indicated the presence of strong antiferromagnetic interactions.
Figure 2
Examination of the bond lengths and angles between Fe(III) ions in 1 for magneto-structural correlations reveal two obvious antiferromagnetic interactions. The quantitative approximation of the exchange interactions for the 3D oxo-bridged Fe(III) systems was obtained by fitting the appropriate theoretical equation to the experimental data separately in 22~300 K, through using the program Origin8.6. The Heisenberg spin-Hamiltonian (Eq. 1):
$ \overset{\lower0.5em\hbox{$\smash{\scriptscriptstyle\frown}$}}{H} = - 2J({\vec S_1}{\vec S_4} + {\vec S_2}{\vec S_3}) - 2J'({\vec S_1}{\vec S_5} + {\vec S_2}{\vec S_5} + {\vec S_3}{\vec S_5} + {\vec S_4}{\vec S_5})$ (Eq.1) Where J and J' characterize the exchange of Fe(1)···Fe(1)c and Fe(1)···Fe(2) through µ3-O bridge for 1 (inset Fig. 2). The best fitting gave: g = 2.026, J = –2.066 cm–1, J' = –1.80 × 10–4 cm–1, and R = ∑ [(χobs – χcalc) 2/∑(χobs) 2 = 1.20 × 10–5. These results further support intracluster antiferromagnetic coupling between the Fe(III) ions in 1 through μ3-O bridges.
The χm–1-T curve follows the Curie-Weiss law [χm = C/(T–θ)] (Fig. S4) severally in 70~300 K with a Weiss constant of θ to be –70.59 K and Curie constant of C being 7.90 cm3⋅K⋅mol–1. The negative Weiss constant suggests dominant intracluster antiferromagnetic coupling between adjacent Fe(III) ions through μ3-O bridges.
3.3 Hirshfeld surface analysis
Hirshfeld surface analysis is a useful tool for describing the surface characteristics of the molecules[28-31], which was performed to visualize the different intermolecular interactions in crystal structures by employing 3D molecular surface contours. The Hirshfeld surfaces in the crystal structure of a particular complex are constructed on the basis of the electron distribution calculated as the sum of spherical atom electron densities. Inside the Hirshfeld surface the electron distribution due to a sum of spherical atoms for the molecule (the pro-molecule) dominates the corresponding sum over the crystal (the pro-crystal), and the Hirshfeld surface is defined as the ratio of the pro-molecule to pro-crystal electron densities equal to 0.5.
One of the useful supplements for Hirshfeld surface analysis is the 2D fingerprint plot. It quantitatively analyzes the nature and type of intermolecular interaction between the molecules inside the crystals. The fingerprint plots can be decomposed to highlight particularly close contacts between the elements (Fig. 3). The Br···H interaction is one of the most significant contacts for 1.
Figure 3
For 1, the Br···H interactions are represented by four blades in the fingerprint plot. So we can infer that there are significant N–H···Br (N(9)–H(9)···Br(1)iii, 3.516 Å, N(10)– H(10a)···Br(1)iii, 3.672 Å, symmetry code: (iii) 0.5–y, x–0.5, 0.5–z) interactions observed in complex 1 (The percentage of Br…H contact of 1 is 45.4%). H···H contacts are the second major intermolecular interaction. Another main intermolecular interaction of 1 is N···H contacts which reflected in the middle of the scattered point of the 2-D fingerprint plots (The percentage of N···H contacts of 1 is 18.6%). In the solid state structure, abundant N–H···N hydrogen bonds (N(10)–H(10a)ii···N(4)ii, 2.931 Å, N(10)–H(10b)ii···N(5)ii, 2.913 Å symmetry code: (ii) y, x–0.5, 0.25+z) were observed. Also, the C···C contacts play important roles for 1. The percentage of C···C contacts of 1 is 3.2%. π···π interactions were also observed (π(C(3)–C(8)···π(C(3)–C(8)iv distance is 3.457 Å, symmetry code: (iv) x, 0.5–y, 0.25–z, Fig. S2).
3.4 Thermogravimetric analysis
Considering the fact that multinuclear clusters based on tetrazolium are well-known for their high thermal stability, we also investigated the thermal analysis of 1 in this work. The sample was heated in a platinum crucible at a rate of 10 ℃⋅min–1 under a nitrogen atmosphere within the temperature range of 25 to 1030 ℃ (Fig. 4). At first, between 25 and 115 ℃, 1 loses 10.5% of the weight continuously, corresponding to the loss of five water molecules and a countercation [HN(C2H5)3] in 1. The weightlessness rate (10.5%) is consistent with the theoretical weightlessness rate (10.09%). The anionic [Fe5(timb)4(ATZ)4(μ3-O)2]– of 1 reveals high thermal stability, which begins to break down at 217 ℃.
Figure 4
4. CONCLUSION
In summary, a penta-nuclear Fe(III) cluster has been successfully synthesized with FeCl3·6H2O, together with H2timb Schiff base ligand. The Hirshfeld surface analysis results indicate that Br···H interactions play a most considerable role in stabilizing the self-assembly process. Magnetic studies reveal that complex 1 displays dominant antiferromagnetic intracluster interactions between FeIII ions through μ3-O bridges. In addition, the pentanuclear FeIII clusters manifest high stability.
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[1]
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Table 1. Selected Bond Lengths (Å) and Bond Angles (°) for 1
Bond Dist. Bond Dist. Bond Dist. Fe(1)–O(1) 1.919(3) Fe(2)–O(1)i 1.880(6) Fe(1)–N(6) 2.078(6) Fe(1)–O(2) 1.907(5) Fe(2)–O(1) 1.880(6) Fe(1)–N(7)iii 2.145(6) Fe(1)–N(1) 2.191(6) Fe(2)–N(2) 2.113(6) Fe(2)–N(2)ii 2.113(6) Fe(2)–N(2)iii 2.113(6) Angle (°) Angle (°) Angle (°) O(1)–Fe(1)–N(1) 99.70(18) O(1)–Fe(2)–N(2)ii 86.48(14) N(7)iii–Fe(1)–N(1) 87.0(2) O(1)–Fe(1)–N(3)i 82.99(19) O(1)–Fe(2)–N(2) 93.52(14) N(7)iii–Fe(1)–N(3)i 165.6(2) O(1)–Fe(1)–N(6) 85.0(2) O(1)–Fe(2)–N(2)i 93.52(14) O(2)–Fe(1)–N(1) 172.9(2) O(1)–Fe(1)–N(7)iii 83.6(2) O(1)–Fe(2)–N(2)iii 93.52(14) O(2)–Fe(1)–N(3)i 96.4(2) O(2)–Fe(1)–O(1) 174.68(18) N(2)i–Fe(2)–N(2)iii 90.216(18) O(2)–Fe(1)–N(6) 89.8(2) N(6)–Fe(1)–N(1) 172.9(2) O(1)i–Fe(2)–O(1) 180.0 O(2)–Fe(1)–N(7)iii 97.4(2) N(6)–Fe(1)–N(3)i 95.8(2) O(1)–Fe(2)–N(2)i 86.48(14) O(1)i–Fe(2)–N(2) 86.48(14) N(2)iii–Fe(2)–N(2) 173.0(3) N(2)ii–Fe(2)–N(2)i 173.0(3) O(1)i–Fe(2)–N(2)ii 93.52(14) N(2)i–Fe(2)–N(2) 90.217(18) O(1)i–Fe(2)–N(2)iii 86.48(14) Symmetry transformation: (i) y, –x+1, –z; (ii) –y+1, x, –z; (iii) –x+1, –y+1, z Table 2. Hydrogen Bond Lengths (Å) and Bond Angles (°) for 1
D–H···A d(D–H) d(H···A) d(D···A) ∠DHA N(10)–H(10A)···N(5)iv 0.8600 2.4300 2.9126 116.00 N(10)–H(10B)···O(2) 0.8600 2.3800 3.0351 133.00 N(10)–H(10B···N(4)iv 0.8600 2.4200 2.9320 119.00 C(2)–H(2)···N(5) 0.9300 2.3300 2.7485 107.00 N(9)–H(9)···Br(1)v 0.86 2.80 3.516 141.6 N(10)–H(10A)···Br(1)v 0.86 2.95 3.672 142.9 Symmetry codes: (iv) –y+0.5, −x, z−1/4; (v) 0.5−y, x−0.5, 0.5–z -
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