Recent Advances in Cyclodipeptide Synthases-Dependent Biosynthetic Pathway
- Corresponding author: Li Wenli, liwenli@ouc.edu.cn
Citation:
Zhang Jingxing, Yao Tingting, Liu Jing, Li Huayue, Li Wenli. Recent Advances in Cyclodipeptide Synthases-Dependent Biosynthetic Pathway[J]. Chinese Journal of Organic Chemistry,
;2019, 39(2): 328-338.
doi:
10.6023/cjoc201806003
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The tree was generated using the PhyML program (v3.1) based on the maximum likelihood method. CDPSs' names consist of the corresponding accession numbers in the NCBI database and the host organisms in which they were found. The two main branches corresponding to the XYP and NYH subfamilies are shown in blue and red, respectively
(A) Superimposition of the cartoon structures of AlbC (PDB ID, 3OQV; light magenta), Rv2275 (PDB ID, 2X9Q; green), and YvmC (PDB ID, 3OQH; cyan). (B) Superimposition of the cartoon structures of AlbC and TyrRS of M. jannaschii (PDB ID, 1J1U). AlbC is in light magenta; TyrRS is in lemon; a C-terminal domain involved in tRNA-binding and anticodon recognition coloured in gray. (C) Superimposition of the cartoon structures of AlbC and Rgry-CDPS (PDB ID, 5MLP). The first half of the Rossmann fold of AlbC is in hot pink and Rgry-CDPS is in light blue; the second half of the Rossmann fold of AlbC is in light magenta and Rgry-CDPS is in sky blue
The function of gene Ndas_1145 remains to be clarified