Application of Combining X-ray Diffraction and Electron Crystallography for Determination of Complex Inorganic Crystal Structure
- Corresponding author: Sun Junliang, junliang.sun@pku.edu.cn
Citation: Li Jian, Lin Cong, Lin Jianhua, Sun Junliang. Application of Combining X-ray Diffraction and Electron Crystallography for Determination of Complex Inorganic Crystal Structure[J]. Acta Physico-Chimica Sinica, ;2020, 36(1): 190705. doi: 10.3866/PKU.WHXB201907052
Chen, X. M.; Cai, J. W. Principle and Practice of Single Crystal Structure Analysis; Science Press: Beijing, 2007; p. 15.
Zou, X. D.; Hovmoller, S.; Oleynikov, P. Electron Crystallography Electron Microscopy and Electron Diffraction; Oxford University Press: UK, 2011; p. 86.
Patterson, A. L. Phys. Rev. 1934, 46, 372. doi: 10.1103/PhysRev.46.372
doi: 10.1103/PhysRev.46.372
Sheldrick, G. M. Acta Crystallogr. A 1990, 46, 467. doi: 10.1107/S0108767390000277
doi: 10.1107/S0108767390000277
Oszlányi, G.; Sütő, A. Acta Crystallogr. A 2004, 60, 134. doi: 10.1107/S0108767303027569
doi: 10.1107/S0108767303027569
De Vries, R. Y.; Briels, W. J.; Feil, D. Acta Crystallogr. A 1994, 50, 383. doi: 10.1107/S0108767393012802
doi: 10.1107/S0108767393012802
Mitchell, M. An Introduction to Genetic Algorithms; MIT Press Cambridge: MA, USA, 1998.
Deem, M. W.; Newsam, J. M. J. Am. Chem. Soc. 1992, 114, 7189. doi: 10.1021/ja00044a035
doi: 10.1021/ja00044a035
Tang, L. Q.; Shi, L.; Bonneau, C.; Sun, J. L.; Yue, H. J.; Ojuva, A.; Lee, B. L.; Kritikos, M.; Bell, R. G.; Bacsik, Z.; et al. Nat. Mater. 2008, 7, 381. doi: 10.1038/nmat2169
doi: 10.1038/nmat2169
Su, J.; Wang, Y. X.; Wang, Z. M.; Lin, J. H. J. Am. Chem. Soc. 2009, 131, 6080. doi: 10.1021/ja901330u
doi: 10.1021/ja901330u
Baerlocher, Ch.; Gramm, F.; Massguer, L.; McCusker, L. B.; He, Z.; Hovmoller, S.; Zou, X. Science 2007, 315, 1113. doi: 10.1126/science.1137920
doi: 10.1126/science.1137920
Lorgouilloux, Y.; Dodin, M.; Paillaud, J. L.; Caullet, P.; Michelin, L.; Josien, L.; Ersen, O.; Bats, N. J. Solid State Chem. 2009, 182, 622. doi: 10.1016/j.jssc.2008.12.002
doi: 10.1016/j.jssc.2008.12.002
Inge, A.; Huang, S. L.; Chen, H.; Moraga, F.; Sun, J. L.; Zou, X. D. Cryst. Growth Des. 2012, 12, 4853. doi: 10.1021/cg300647s
doi: 10.1021/cg300647s
Ju, J.; Lin, J. H.; Li, G. B.; Yang, T.; Li, H. M.; Liao, F. H.; Loong, C. K.; You, L. P. Angew. Chem. Int. Ed. 2003, 42, 5607. doi: 10.1002/anie.200352263
doi: 10.1002/anie.200352263
Yang, T.; Bartoszewicz, A.; Ju, J.; Sun, J. L.; Liu, Z.; Zou, X. D.; Wang, Y. X.; Li, G. B.; Liao, F. H.; Martín, M. B.; et al. Angew. Chem. Int. Ed. 2011, 50, 12555. doi: 10.1002/anie.201106310
doi: 10.1002/anie.201106310
Estermann, M. A.; McCusker, L. B.; Baerlocher, C. J. Appl. Cryst. 1992, 25, 539. doi: 10.1107/S0021889892004862
doi: 10.1107/S0021889892004862
Baerlocher, Ch.; McCusker, L. B.; Palatinus, L. Z. Kristallogr. 2007, 222, 47. doi: 10.1524/zkri.2007.222.2.47
doi: 10.1524/zkri.2007.222.2.47
Kolb, U.; Mugnaioli, E.; Gorelik, T. E. Cryst. Res. Technol. 2011, 46, 542. doi: 10.1002/crat.201100036
doi: 10.1002/crat.201100036
Zhang, D.; Oleynikov, P.; Hovmoller, S.; Zou, X. D. Z. Kristallogr. 2010, 225, 94. doi: 10.1524/zkri.2010.1202
doi: 10.1524/zkri.2010.1202
Xu, L.; Zhang L.; Li, J.; Koki, M.; Peng, F.; Xu, H.; Lin, C.; Gao, L.; Jiang, J. G; Watcharop, C.; et al. Chem. Eur. J. 2018, 24, 9247. doi: 10.1002/chem.201802087
doi: 10.1002/chem.201802087
Hua, W.; Chen, H.; Yu, Z. B.; Zou, X. D.; Lin, J. H.; Sun, J. L. Angew. Chem. Int. Ed. 2014, 53, 5868. doi: 10.1002/anie.201309766
doi: 10.1002/anie.201309766
Huang, S. L.; Su, J.; Kirsten, C.; Ken, I.; Liang, J.; Zou, X. D.; Sun, J. L. Inorg. Chem. Front. 2014, 1, 278. doi: 10.1039/C3QI00088E
doi: 10.1039/C3QI00088E
Zhang, Y. B.; Su, J.; Hiroyasu, F.; Yun, Y. F.; Felipe, G.; Adam, D.; Zou, X. D.; Omar, M. Y. J. Am. Chem. Soc. 2013, 135, 16336. doi: 10.1021/ja409033p
doi: 10.1021/ja409033p
Ding, H.; Li, J.; Xie, G. H.; Lin, G. Q.; Chen, R. F.; Peng, Z. K.; Yang, C. L.; Wang, B. S.; Sun, J. L.; Wang, C. Nat. Commun. 2018, 9, 5234. doi: 10.1038/s41467-018-07670-4.
doi: 10.1038/s41467-018-07670-4
Ma, T.; Li, J.; Niu, J.; Zhang, L.; Ahmed S, E.; Lin, C.; Shi, D.; Chen, P. H.; Li, L. H.; Du, X.; et al. J. Am. Chem. Soc. 2018, 40, 6763. doi: 10.1021/jacs.8b03169
doi: 10.1021/jacs.8b03169
Gramm, F.; Baerlocher, C.; McCusker, L. B.; Warrender, S. J.; Wright, P. A.; Han, B.; Hong, S. B.; Liu, Z.; Ohsuna, T.; Terasaki, O. Nature 2006, 444, 79. doi: 0.1038/nature05200
doi: 10.1038/nature05200
Willhammar, T.; Sun, J. L.; Wan, W.; Oleynikov, P.; Zhang, D. L.; Zou, X. D.; Moliner, M.; Gonzalez, J.; Martínez, C.; Rey, F.; et al. Nat. Chem. 2012, 3, 188. doi: 10.1038/nchem.1253
doi: 10.1038/nchem.1253
Han, Y.; Zhang, D.; Chng, L. L.; Sun, J.; Zhao, L.; Zou, X.; Ying, J. Y. Nat. Chem. 2009, 1, 123. doi: 10.1038/nchem.166
doi: 10.1038/nchem.166
Baerlocher, C.; Xie, D.; McCusker, L. B.; Hwang, S. J.; Chan, I. Y.; Ong, K.; Burton, A. W.; Zones, S. I. Nat. Mater. 2008, 7, 631. doi: 10.1038/nmat2228
doi: 10.1038/nmat2228
Xu, L.; Ji, X.; Jiang, J.; Han, L.; Che, S.; Wu, P. Chem. Mater. 2015, 27, 7852. doi: 10.1021/acs.chemmater.5b03658
doi: 10.1021/acs.chemmater.5b03658
Grosse-Kunstleve, R. W.; McCusker, L. B.; Baerlocher, C. J. Appl. Cryst. 1999, 32, 536. doi: 10.1107/S0021889899003453
doi: 10.1107/S0021889899003453
Sun, J. L.; Bonneau, C.; Cantin, A.; Corma, A.; Diaz-Cabanas, M. J.; Moliner, M.; Zhang, D. L.; Li, M. R.; Zou, X. D. Nature 2009, 458, 1154. doi: 10.1038/nature07957
doi: 10.1038/nature07957
Chen, H.; Ju, J.; Meng, Q.; Su, J.; Lin, C.; Zhou, Z. Y.; Li, G.; Wang, W.; Gao, W.; Zeng, C.; et al. J. Am. Chem. Soc. 2015, 137, 7047. doi: 10.1021/jacs.5b03685
doi: 10.1021/jacs.5b03685
Li, J.; Lin, C.; Min, Y. X.; Yuan, Y. Y.; Li, G. B.; Yang, S. H.; Pascal, M.; Lin, J. H.; Sun, J. L. J. Am. Chem. Soc. 2019, 141, 12, 4990. doi: 10.1021/jacs.9b00093
doi: 10.1021/jacs.9b00093
Yu, Z. B.; Han, Y.; Zhao, L.; Huang, S. L.; Zheng, Q. Y.; Lin, S. Z.; Córdova, A.; Zou, X. D.; Sun, J. L. Chem. Mater. 2012, 24, 3701. doi: 10.1021/cm301654d
doi: 10.1021/cm301654d
Nnewsam, J. M.; Treacy, M. M. J.; Koetsier, W. T.; de Gruyter, C. B. Proc. R. Soc. London Ser. A 1988, 420, 375. doi: 10.1098/rspa.1988.0131
doi: 10.1098/rspa.1988.0131
Conradsson, T.; Zou, X. D.; Dadachov, M. Inorg. Chem. 2000, 39, 1716. doi: 10.1021/ic9911217
doi: 10.1021/ic9911217
Corma, A.; Moliner, M.; Cantín, Á.; Díaz-Cabañas, M.; Jordá, J.; Zhang, D.; Sun, J. L.; Jansson, K.; Hovmöller, S.; Zou, X. D. Chem. Mater. 2008, 20, 3218. doi: 10.1021/cm8002244
doi: 10.1021/cm8002244
Willhammar, T.; Zou, X. D. Z. Kristallogr. 2013, 228, 11. doi: 10.1524/zkri.2012.1564
doi: 10.1524/zkri.2012.1564
Liu, L. F.; Yu, Z. B.; Chen, H.; Deng, Y.; Lee, B.; Sun, J. L. Cryst. Growth Des. 2013, 13, 4168. doi: 10.1021/cg400880a
doi: 10.1021/cg400880a
Wadlinger, R. L.; Kerr, G. T.; Rosinski, E. J. Catalytic Composition of a Crystalline Zeolite. US Patent 3308069, 1967.
Xu, Y.; Liu, L. F.; Daniel, M.; Sun, J. L.; Zhang, P.; Yu, J. H. Inorg. Chem. 2013, 52, 10238. doi: 10.1021/ic302705f
doi: 10.1021/ic302705f
Yang, S. H.; Sun, J. L.; Ramirez-Cuesta, A.; Callear, S.; David, W.; Anderson, D.; Newby, R.; Blake, A.; Parker, J.; Tang, C.; et al. Nat. Chem. 2012, 4, 887. doi: 10.1038/nchem.1457
doi: 10.1038/nchem.1457
Lo, B.; Ye, L.; Qu, J.; Sun, J. L.; Zheng, J.; Kong, D.; Murray, C.; Tang, C.; Tsang, S. Angew. Chem. Int. Ed. 2016, 55, 1. doi: 10.1002/anie.201600487
doi: 10.1002/anie.201600487
Liang, J.; Su, J.; Wang, Y.; Chen, Y.; Zou, X.; Liao, F.; Lin, J.; Sun, J. L. Chem. Eur. J. 2014, 20, 16097. doi: 10.1002/chem.201405449
doi: 10.1002/chem.201405449
Inge, A. K.; Fahlquist, H.; Willhammar, T.; Huang, Y.; McCusker, L. B.; Zou, X. J. Appl. Crystallogr. 2013, 46, 1094. doi: 10.1107/S0021889813013101
doi: 10.1107/S0021889813013101
Yamamoto, A. Acta Crystallogr. A 1993, 49, 831. doi: 10.1107/S0108767393004404
doi: 10.1107/S0108767393004404
Li, M.; Sun, J. L.; Peter, O.; Sven, H.; Zou, X. D.; Benjamin, G. Acta Crystallogr. B 2010, 66, 17. doi: 10.1107/S0108768109053804
doi: 10.1107/S0108768109053804
Li, J.; Sun, J. L. Acc. Chem. Res. 2017, 50, 2737. doi: 10.1021/acs.accounts.7b00366
doi: 10.1021/acs.accounts.7b00366
Sun, J. L.; Lee, S.; Lin, J. H. Chem. Asian J. 2007, 2, 1204. doi: 10.1002/asia.200700088
doi: 10.1002/asia.200700088
Sun, J. L.; Li, G. B.; Li, Z. F.; You, L. P.; Lin, J. H. Inorg. Chem. 2006, 45, 8394. doi: 10.1021/ic060862m
doi: 10.1021/ic060862m
Zhou, Z.; Xu, X.; Fei, R.; Mao, J.; Sun, J. L. Acta Crystallogr. B 2016, 72, 194. doi: 10.1107/S2052520615019733
doi: 10.1107/S2052520615019733
Schmidt, J.; Lee, S.; Fredrickson, D.; Conrad, M.; Sun, J. L.; Harbrecht, B. Chem. Eur. J. 2007, 13, 1394. doi: 10.1002/chem.200600135
doi: 10.1002/chem.200600135
Sun, Z. H.; Li, J.; Ji, C. M.; Sun, J. L.; Hong, M. C.; Luo, J. H. J. Am. Chem. Soc. 2017, 139, 44, 15900. doi: 10.1021/jacs.7b08950
doi: 10.1021/jacs.7b08950
Lin, K.; Zhou, Z.; Liu, L.; Ma, H.; Chen, J.; Deng, J.; Sun, J. L.; You, L.; Kasai, H.; Kato, K.; et al. J. Am. Chem. Soc. 2015, 137, 13468. doi: 10.1021/jacs.5b08230
doi: 10.1021/jacs.5b08230
Wang, Y.; Yang, T.; Xu, H.; Zou, X. D.; Wan, W. J. Appl. Cryst. 2018, 51, 1094. doi: 10.1107/S1600576718007604
doi: 10.1107/S1600576718007604
Wang, Y.; Takki, S.; Cheung, O.; Xu, H.; Wan, W.; Ohrstrom, L.; Inge, A. K. Chem. Commun. 2017, 53, 7018. doi: 10.1039/C7CC03180G
doi: 10.1039/C7CC03180G
Wang, B.; Timo R.; Inge, A. K.; Xu, H. Y.; Yang, T. M.; Huang, Z. H.; Norbert S.; Zou, X. D. Chem. Eur. J. 2018, 24, 17429. doi: 10.1002/chem.201804133
doi: 10.1002/chem.201804133
Xu, H.; Lebratte, H.; Yang, T.; Srinivas, V.; Hovmoller, S.; Hogbom, M.; Zou, X. Structure 2018, 26, 667. doi: 10.1016/j.str.2018.02.015
doi: 10.1016/j.str.2018.02.015
Nannenga, B. L.; Shi, D.; Hattne, J.; Reyes, F. E.; Gonen, T. eLife 2014, 3, e03600. doi: 10.7554/eLife.03600
doi: 10.7554/eLife.03600
de la Cruz, M. J.; Hattne, J.; Shi, D.; Seidler, P.; Rodriguez, J.; Reyes, F. E.; Sawaya, M. R.; Cascio, D.; Weiss, S. C.; Kim, S. K.; et al. Nat. Methods 2017, 14, 399. doi: 10.1038/nmeth.4178
doi: 10.1038/nmeth.4178
Rodriguez, J. A.; Ivanova, M. I.; Sawaya, M. R.; Cascio, D.; Reyes, F. E.; Shi, D.; Sangwan, S.; Guenther, E. L.; Johnson, L. M.; Zhang, M.; et al. Nature 2015, 525, 486. doi: 10.1038/nature15368
doi: 10.1038/nature15368
Christopher, G. J.; Michael, W. M.; Johan, H.; Tyler, J. F.; Brian, M. S.; Jose, A. R.; Hosea, M. N.; Gonen, T. ACS Cent. Sci. 2018, 4, 1587. doi: 10.1021/acscentsci.8b00760
doi: 10.1021/acscentsci.8b00760
Gruene, T.; Wennmacher, J.; Zaubitzer, C.; Holstein, J. J.; Heidler, J.; Fecteau-Lefebvre, A.; De Carlo, S.; Müller, E.; Goldie, K. N.; Regeni, I.; et al. Angew. Chem. Int. Ed. 2018, 57, 16313. doi: 10.1002/anie.201811318
doi: 10.1002/anie.201811318
Palatinus, L.; Brazda, P.; Boullay, P.; Perez, O.; Klementova, M.; Petit, S.; Eigner, V.; Zaarour, M.; Mintova, S. Science 2017, 335, 166. doi: 10.1126/science.aak9652
doi: 10.1126/science.aak9652
Xu, H. Y.; Zou, X. D. Science 2019, 364, 632. doi: 10.1126/science.aax5385
doi: 10.1126/science.aax5385
Brázda, P.; Palatinus, L.; Babor, M. Science 2019, 364, 667. doi: 10.1126/science.aaw2560
doi: 10.1126/science.aaw2560
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