Citation:
MA Chi-Cheng, PU Min, WEI Min, LI Jun-Nan, LI Zhi-Hong. Two Possible Photoreaction Pathways on the L-Valine Optical Isomerization[J]. Acta Physico-Chimica Sinica,
;2012, 28(08): 1830-1836.
doi:
10.3866/PKU.WHXB201205162
-
The photoreaction mechanism of L-valine optical isomerization was studied by the density functional theory (DFT) and ab initio molecular orbital theory. The geometric parameters of reactant, product, intermediates, and transition states on the reaction paths in S0 and T1 states were optimized at the level of B3LYP and MP2 methods and 6-311++G(d, p) basis sets and the reaction energy barriers were obtained by the same methods. The equilibrium geometries on the S1 state of valine were also optimized by the method of time dependent density functional theory (TD-DFT) with B3LYP/6-311++G(d, p) level. Through the analysis of each stationary point geometric feature on the reaction path, the photoreaction mechanisms of L-valine optical isomerization were proposed in which the whole reaction was accomplished through hydrogen transfer with the help of carbonyl O or amino N atom in excited state. Furthermore the effect of solvent on the reaction mechanism of isomers was discussed by the method of polarizable continuum model (PCM) of self consistent reaction field theory.
-
-
-
[1]
(1) Minami, M.; Takeyama, M.; Mimura, K.; Nakamura, T. Nucl. Instrum. Methods Phys. Res. Sect. B 2007, 259, 547. doi: 10.1016/j.nimb.2007.01.201
-
[2]
(2) Amelung,W.; Zhang, X.; Flach, K.W. Geoderma 2006, 130,207. doi: 10.1016/j.geoderma.2005.01.017
-
[3]
(3) Sajdok, J.; Kozak, A.; Zidkova, J.; Kotsba, P.; Pilin, A.; Kas, J.Chem. Listy 2001, 95, 98.
-
[4]
(4) Tomiyama, T.; Asano, S.; Furiya, Y.; Shirasawa, T.; Endo, N.;Mori, H. J. Biol. Chem. 1994, 269, 10205.
-
[5]
(5) Friedman, M. J. Agric. Food Chem. 1999, 47, 3457. doi: 10.1021/jf990080u
-
[6]
(6) Martineau, M.; Baux, G.; Mothet, J. P. J. Physiol. -Paris 2006,99, 103. doi: 10.1016/j.jphysparis.2005.12.011
-
[7]
(7) Chu, Y. Q.; Pan, T. T.; Dai, Z. Y.; Yu, Z.W.; Zheng, S. B.; Ding,C. F. Acta Phys. -Chim. Sin. 2008, 24, 1981. [储艳秋, 潘婷婷,戴兆云, 俞卓伟, 郑松柏, 丁传凡. 物理化学学报, 2008, 24,1981.] doi: 10.3866/PKU.WHXB20081108
-
[8]
(8) Qi, J. Studies on Configuration Transformation of L-Proline andL-Valine. M.S. Dissertation, Nanchang University, Jiangxi,2006. [漆剑. L-脯氨酸和L-缬氨酸构型转换的研究[D].南昌: 南昌大学, 2006.]
-
[9]
(9) Mei, L. H.; Yao, S. J.; Guan, Y. X.; Lin, D. Q. Chinese Journal of Pharmaceuticals 1999, 30 (5), 235. [梅乐和, 姚善泾, 关怡新, 林东强. 中国医药工业杂志, 1999, 30 (5), 235.]
-
[10]
(10) Chen, Y.;Wang,W. Q.; Du,W. M. Acta Phys. -Chim. Sin. 2004,20, 540. [陈渝, 王文清, 杜为民. 物理化学学报, 2004, 20,540.] doi: 10.3866/PKU.WHXB20040519
-
[11]
(11) Frauli, M.; Ludwig, H. Arch. Gynecol. Obstet. 1987, 241, 87.doi: 10.1007/BF00931229
-
[12]
(12) Picciano, P. T.; Johnson, B.;Walenga, R.W.; Donovan, M.;Douglas, B. J.; Kreutzer, D. L. Exp. Cell Res. 1984, 51, 134.
-
[13]
(13) Li, A. P.; Zhao, Q.; Cheng, X. C.; Xu, H. Q. Journal of Anhui Agricultural Sciences 2010, 38 (14), 7208. [李爱平, 赵青,程晓春, 徐海青. 安徽农业科学, 2010, 38 (14), 7208.]
-
[14]
(14) Dakin, H. D. Am. Chem. J. 1910, 44, 48.
-
[15]
(15) Neuberger, A. Adv. Protein Chem. 1948, 4, 297. doi: 10.1016/S0065-3233(08)60009-1
-
[16]
(16) Ebbers, E. J.; Ariaans, G. J. A.; Houbiers, J. P. M.; Bruggink, A.;Zwanenburg, B. Tetrahedron 1997, 53, 9417. doi: 10.1016/S0040-4020(97)00324-4
-
[17]
(17) Smith, G. G.; Sivakua, T. J. Org. Chem. 1983, 48, 627.
-
[18]
(18) Sullivan, R.; Pyda, M.; Pak, J.;Wunderlich, B.; Thompson, J.R.; Pagni, R.; Pan, H.; Barnes, C.; Schwerdtfeger, P.; Compton,R. J. Phys. Chem. A 2003, 107, 6674. doi: 10.1021/jp0225673
-
[19]
(19) Wei, M.; Xu, X. Y.; He, J.; Yuan, Q.; Rao, G. Y.; Evans, D. G.;Pu, M.; Yang, L. J. Phys. Chem. Solids 2006, 67, 1469. doi: 10.1016/j.jpcs.2006.01.118
-
[20]
(20) Wei, M.; Pu, M.; Guo, J.; Han, J. B.; Li, F.; He, J.; Evans, D. G.;Duan, X. Chem. Mater. 2008, 20, 5169. doi: 10.1021/cm800035k
-
[21]
(21) Frisch, M. J.; Trucks, G.W.; Schlegel, H. B.; et al. Gaussian 09,Revision A.01; Gaussian Inc.:Wallingford, CT, 2009.
-
[22]
(22) Linder, R.; Nispel, M.; Haber, T.; Kleiermanns, K. Chem. Phys. Lett. 2005, 409, 260. doi: 10.1016/j.cplett.2005.04.109
-
[23]
(23) Li, J.; Brill, T. B. J. Phys. Chem. A 2003, 107, 5993. doi: 10.1021/jp022477y
-
[24]
(24) mzi, V.; Herak, J. J. Mol. Struct. -Theochem 2003, 629, 71.
-
[25]
(25) Ren, X. H. Theoretical Study of Interaction between Solventand Amino Acids. M.S. Dissertation, Jiangnan University,Jiangsu, 2008. [任晓慧. 氨基酸分子与溶剂间相互作用的理论研究[D]. 无锡: 江南大学, 2008.]
-
[26]
(26) Yu, Y.; Huang, D. F.;Wang, D. X. Chin. J. Chem. Phys. 2005,18, 336. [俞英, 黄东枫, 王大喜. 化学物理学报, 2005, 18,336.]
-
[1]
-
-
-
[1]
Hao XU , Ruopeng LI , Peixia YANG , Anmin LIU , Jie BAI . Regulation mechanism of halogen axial coordination atoms on the oxygen reduction activity of Fe-N4 site: A density functional theory study. Chinese Journal of Inorganic Chemistry, 2025, 41(4): 695-701. doi: 10.11862/CJIC.20240302
-
[2]
Kaifu Zhang , Shan Gao , Bin Yang . Application of Theoretical Calculation with Fun Practice in Raman Spectroscopy Experimental Teaching. University Chemistry, 2025, 40(3): 62-67. doi: 10.12461/PKU.DXHX202404045
-
[3]
Jie ZHAO , Sen LIU , Qikang YIN , Xiaoqing LU , Zhaojie WANG . Theoretical calculation of selective adsorption and separation of CO2 by alkali metal modified naphthalene/naphthalenediyne. Chinese Journal of Inorganic Chemistry, 2024, 40(3): 515-522. doi: 10.11862/CJIC.20230385
-
[4]
Jie ZHAO , Huili ZHANG , Xiaoqing LU , Zhaojie WANG . Theoretical calculations of CO2 capture and separation by functional groups modified 2D covalent organic framework. Chinese Journal of Inorganic Chemistry, 2025, 41(2): 275-283. doi: 10.11862/CJIC.20240213
-
[5]
Meifeng Zhu , Jin Cheng , Kai Huang , Cheng Lian , Shouhong Xu , Honglai Liu . Classical Density Functional Theory for Understanding Electrochemical Interface. University Chemistry, 2025, 40(3): 148-152. doi: 10.12461/PKU.DXHX202405166
-
[6]
Xiaochen Zhang , Fei Yu , Jie Ma . 多角度数理模拟在电容去离子中的前沿应用. Acta Physico-Chimica Sinica, 2024, 40(11): 2311026-. doi: 10.3866/PKU.WHXB202311026
-
[7]
Weina Wang , Lixia Feng , Fengyi Liu , Wenliang Wang . Computational Chemistry Experiments in Facilitating the Study of Organic Reaction Mechanism: A Case Study of Electrophilic Addition of HCl to Asymmetric Alkenes. University Chemistry, 2025, 40(3): 206-214. doi: 10.12461/PKU.DXHX202407022
-
[8]
Yanglin Jiang , Mingqing Chen , Min Liang , Yige Yao , Yan Zhang , Peng Wang , Jianping Zhang . Experimental and Theoretical Investigations of Solvent Polarity Effect on ESIPT Mechanism in 4′-N,N-diethylamino-3-hydroxybenzoflavone. Acta Physico-Chimica Sinica, 2025, 41(2): 100012-. doi: 10.3866/PKU.WHXB202309027
-
[9]
Maitri Bhattacharjee , Rekha Boruah Smriti , R. N. Dutta Purkayastha , Waldemar Maniukiewicz , Shubhamoy Chowdhury , Debasish Maiti , Tamanna Akhtar . Synthesis, structural characterization, bio-activity, and density functional theory calculation on Cu(Ⅱ) complexes with hydrazone-based Schiff base ligands. Chinese Journal of Inorganic Chemistry, 2024, 40(7): 1409-1422. doi: 10.11862/CJIC.20240007
-
[10]
Yaling Chen . Basic Theory and Competitive Exam Analysis of Dynamic Isotope Effect. University Chemistry, 2024, 39(8): 403-410. doi: 10.3866/PKU.DXHX202311093
-
[11]
Jia Yao , Xiaogang Peng . Theory of Macroscopic Molecular Systems: Theoretical Framework of the Physical Chemistry Course in the Chemistry “101 Plan”. University Chemistry, 2024, 39(10): 27-37. doi: 10.12461/PKU.DXHX202408117
-
[12]
Yufang GAO , Nan HOU , Yaning LIANG , Ning LI , Yanting ZHANG , Zelong LI , Xiaofeng LI . Nano-thin layer MCM-22 zeolite: Synthesis and catalytic properties of trimethylbenzene isomerization reaction. Chinese Journal of Inorganic Chemistry, 2024, 40(6): 1079-1087. doi: 10.11862/CJIC.20240036
-
[13]
Hui Li , Jia Nie , Zhongyuan Lü , Hujun Qian , Youliang Zhu , Fuquan Bai , Zexing Qu , Ronglin Zhong . Developing a Lecture Mode for Theoretical and Computational Chemistry Curriculum under the “Modernization of Chinese Education” Initiative. University Chemistry, 2025, 40(3): 1-9. doi: 10.3866/PKU.DXHX202402007
-
[14]
Feiyang Liu , Liuhong Song , Miaoyu Fu , Zhi Zheng , Gang Xie , Junlong Zhao . Tryptophan’s Employment Journey. University Chemistry, 2024, 39(9): 16-21. doi: 10.12461/PKU.DXHX202404037
-
[15]
Yu'ang Liu , Yuechao Wu , Junyu Huang , Tao Wang , Xiaohong Liu , Tianying Yan . Computation of Absolute Electrode Potential of Standard Hydrogen Electrode Using Ab Initio Method. University Chemistry, 2025, 40(3): 215-222. doi: 10.12461/PKU.DXHX202407112
-
[16]
Hua Hou , Baoshan Wang . Course Ideology and Politics Education in Theoretical and Computational Chemistry. University Chemistry, 2024, 39(2): 307-313. doi: 10.3866/PKU.DXHX202309045
-
[17]
Supin Zhao , Jing Xie . Understanding the Vibrational Stark Effect of Water Molecules Using Quantum Chemistry Calculations. University Chemistry, 2025, 40(3): 178-185. doi: 10.12461/PKU.DXHX202406024
-
[18]
Rui Gao , Ying Zhou , Yifan Hu , Siyuan Chen , Shouhong Xu , Qianfu Luo , Wenqing Zhang . Design, Synthesis and Performance Experiment of Novel Photoswitchable Hybrid Tetraarylethenes. University Chemistry, 2024, 39(5): 125-133. doi: 10.3866/PKU.DXHX202310050
-
[19]
Xuyang Wang , Jiapei Zhang , Lirui Zhao , Xiaowen Xu , Guizheng Zou , Bin Zhang . Theoretical Study on the Structure and Stability of Copper-Ammonia Coordination Ions. University Chemistry, 2024, 39(3): 384-389. doi: 10.3866/PKU.DXHX202309065
-
[20]
Keweiyang Zhang , Zihan Fan , Liyuan Xiao , Haitao Long , Jing Jing . Unveiling Crystal Field Theory: Preparation, Characterization, and Performance Assessment of Nickel Macrocyclic Complexes. University Chemistry, 2024, 39(5): 163-171. doi: 10.3866/PKU.DXHX202310084
-
[1]
Metrics
- PDF Downloads(736)
- Abstract views(2550)
- HTML views(67)