Citation:
LIN Yuan-Bin, LYU Tian-Qi, WANG Yu-Hui, LI Lin, WU Ai-Guo, CAO Zhang-Lei, ZHENG Jian-Ping. Research Progress of Single-cell RNA Sequencing Technology in Dermatological Applications[J]. Chinese Journal of Analytical Chemistry,
;2022, 50(7): 985-994.
doi:
10.19756/j.issn.0253-3820.210722
-
Single-cell RNA sequencing technology is a high-throughput sequencing technology developed in recent years. It can study cellular gene expression and identify cell heterogeneity at the single cell level, broadening people's understanding of skin development, tumor generation and immune response. Single-cell RNA sequencing studies in skin have systematically revealed the heterogeneity of skin cells, elucidated the pathogenesis of various skin diseases, and identified potential new therapeutic targets for a variety of clinical skin diseases, thus providing guidance for diagnosis and treatment. This article reviewed in detail the single-cell RNA sequencing technology and the latest research progress of this technology in the field of dermatology, aiming to improve the treatment level of skin diseases, and discussed the main challenges for the future development of this field.
-
-
-
[1]
MAZZURANA L, CZARNEWSKI P, JONSSON V, WIGGE L, RINGNR M, WILLIAMS T C, RAVINDRAN A, BJÖRKLUND Å K, SÄFHOLM J, NILSSON G, DAHLÉN S, ORRE A, AL-AMERI M, HÖÖG C, HEDIN C, SZCZEGIELNIAK S, ALMER S, MJÖSBERG J. Cell Res., 2021, 31(5):554-568.
-
[2]
PANDIANI C, STRUB T, NOTTET N, CHELI Y, GAMBI G, BILLE K, HUSSER C, DALMASSO M, BÉRANGER G, LASSALLE S, MAGNONE V, PÉDEUTOUR F, IRONDELLE M, MASCHI C, NAHON-ESTōVE S, MARTEL A, CAUJOLLE J, HOFMAN P, LEBRIGAND K, DAVIDSON I, BAILLIF S, BARBRY P, BALLOTTI R, BERTOLOTTO C. Cell Death Differ., 2021, 28(6):1990-2000.
-
[3]
TANG F C, BARBACIORU C, WANG Y Z, NORDMAN E, LEE C, XU N L, WANG X H, BODEAU J, TUCH B B, SIDDIQUI A, LAO K Q, SURANI M A. Nat. Methods, 2009, 6(5):377-382.
-
[4]
LUECKEN M D, THEIS F J. Mol. Syst. Biol., 2019, 15(6):e8746.
-
[5]
GUO F, LI L, LI J Y, WU X L, HU B Q, ZHU P, WEN L, TANG F C. Cell Res., 2017, 27(8):967-988.
-
[6]
HWANG B, LEE J H, BANG D. Exp. Mol. Med., 2018, 50:96.
-
[7]
DELAUGHTER D M. Curr. Protoc. Mol. Biol., 2018, 122(1):e55.
-
[8]
RAMSKÖLD D, LUO S J, WANG Y, LI R, DENG Q L, FARIDANI O R, DANIELS G A, KHREBTUKOVA I, LORING J F, LAURENT L C. Nat. Biotechnol., 2012, 30(8):777-782.
-
[9]
LI H K, HUMPHREYS B D. Kidney360, 2021, 2(7):1196-1204.
-
[10]
MACOSKO E Z, BASU A, SATIJA R, NEMESH J, SHEKHAR K, GOLDMAN M, TIROSH I, BIALAS A R, KAMITAKI N, MARTERSTECK E M. Cell, 2015, 161(5):1202-1214.
-
[11]
SHINDE P, MOHAN L, KUMAR A, DEY K, MADDI A, PATANANAN A N, TSENG F G, CHANG H Y, NAGAI M, SANTRA T S. Int. J. Mol. Sci., 2018, 19(10):3143.
-
[12]
ZIEGENHAIN C, VIETH B, PAREKH S, REINIUS B, GUILLAUMET-ADKINS A, SMETS M, LEONHARDT H, HEYN H, HELLMANN I, ENARD W. Mol. Cell, 2017, 65(4):631-643.
-
[13]
PICELLI S, BJÖRKLUND Å K, FARIDANI O R, SAGASSER S, WINBERG G, SANDBERG R. Nat. Methods, 2013, 10(11):1096-1098.
-
[14]
BRONNER I F, QUAIL M A. Curr. Protoc. Hum. Genet., 2019, 102(1):e86
-
[15]
CHEN C Y, XING D, TAN L Z, LI H, ZHOU G Y, HUANG L, XIE X S. Science, 2017, 356(6334):189-194.
-
[16]
HICKS S C, TOWNES F W, TENG M X, IRIZARRY R A. Biostatistics, 2017, 19(4):562-578.
-
[17]
LEEK J T, SCHARPF R B, BRAVO H C, SIMCHA D, LANGMEAD B, JOHNSON W E, GEMAN D, BAGGERLY K, IRIZARRY R A. Nat. Rev. Genet., 2010, 11(10):733-739.
-
[18]
HAFEMEISTER C, SATIJA R. Genome Biol., 2019, 20(1):296.
-
[19]
HWANG B, LEE J H, BANG D H. Exp. Mol. Med., 2018, 50(8):1-14.
-
[20]
VAN DER MAATEN L, HINTON G. J. Mach. Learn. Res., 2008, 9(11):2579-2605.
-
[21]
BECHT E, MCINNES L, HEALY J, DUTERTRE C, KWOK I W H, NG L G, GINHOUX F, NEWELL E W. Nat. Biotechnol., 2019, 37(1):38-44.
-
[22]
TENENBAUM J B, DE SILVA V, LANGFORD J C. Science, 2000, 290(5500):2319-2323.
-
[23]
ROWEIS S T, SAUL L K. Science, 2000, 290(5500):2323-2326.
-
[24]
CORTAL A, MARTIGNETTI L, SIX E, RAUSELL A. Nat. Biotechnol., 2021, 39(9):1095-1102.
-
[25]
SHAIN A H, BASTIAN B C. Nat. Rev. Cancer, 2016, 16(6):345-358.
-
[26]
ROGNONI E, WATT F M. Trends Cell Biol., 2018, 28(9):709-722.
-
[27]
JOOST S, ZEISEL A, JACOB T, SUN X Y, LA M G, LÖNNERBERG P, LINNARSSON S, KASPER M. Cell Syst., 2016, 3(3):221-237.
-
[28]
JOOST S, ANNUSVER K, JACOB T, SUN X Y, DALESSANDRI T, SIVAN U, SEQUEIRA I, SANDBERG R, KASPER M. Cell Stem Cell., 2020, 26(3):441-457.
-
[29]
WANG S X, DRUMMOND M L, GUERRERO-JUAREZ C F, TARAPORE E, MACLEAN A L, STABELL A R, WU S C, GUTIERREZ G, THAT B T, BENAVENTE C A. Nat. Commun., 2020, 11(1):4239.
-
[30]
PAWLINA W, ROSS M H. Histology:A Text And Atlas:With Correlated Cell and Molecular Biology, Lippincott Williams&Wilkins, 2018, 1(2):96-139.
-
[31]
VORSTANDLECHNER V, LAGGNER M, KALININA P, HASLIK W, RADTKE C H, SHAW L, LICHTENBERGER B M, TSCHACHLER E, ANKERSMIT H J, MILDNER M. FASEB J., 2020, 34(3):3677-3692.
-
[32]
SOLÉ-BOLDO L, RADDATZ G, SCHVTZ S, MALLM J, RIPPE K, LONSDORF A S, RODRÍGUEZ-PAREDES M, LYKO F. Commun. Biol., 2020, 3(1):188.
-
[33]
LEIDAL A M, LEVINE B, DEBNATH J. Nat. Cell Biol., 2018, 20(12):1338-1348.
-
[34]
ROJAHN T B, VORSTANDLECHNER V, KRAUSGRUBER T, BAUER W M, ALKON N, BANGERT C, THALER F M, SADEGHYAR F, FORTELNY N, GERNEDL V. J. Allergy Clin. Immunol., 2020, 146(5):1056-1069.
-
[35]
ZOU Z R, LONG X, ZHAO Q, ZHENG Y D, SONG M S, MA S, JING Y B, WANG S, HE Y F, ESTEBAN C R, YU N Z, HUANG J Z, CHAN P, CHEN T, IZPISUA B J C, ZHANG W Q, QU J, LIU G H. Dev. Cell., 2021, 56(3):383-397.
-
[36]
SZABO P A, LEVITIN H M, MIRON M, SNYDER M E, SENDA T, YUAN J Z, CHENG Y L, BUSH E C, DOGRA P, THAPA P, FARBER D L, SIMS P A. Nat. Commun., 2019, 10:4706.
-
[37]
MOK K W, SAXENA N, RENDL M. Cell Rep., 2018, 25(4):823-824.
-
[38]
SPRITZ R A, SANTORICO S A. J. Invest. Dermatol., 2021, 141(2):265-273.
-
[39]
FRISOLI MICHAEL L, ESSIEN KINGSLE Y, HARRIS JOHN E. Annu. Rev. Immunol., 2020, 38(1):621-648.
-
[40]
WILLEMSEN M, KREBBERS G, TJIN E P M, WILLEMSEN K J, LOUIS A, KONIJN V A L, NARAYAN V S, POST N F, BAKKER W J, MELIEF C J M, BEKKENK M W, LUITEN R M. Exp. Dermatol., 2021, 25(4):556-566.
-
[41]
XU Z J, CHEN D M, HU Y C, JIANG K J, HUANG H W, DU Y X, WU W B, WANG J W, SUI J H, WANG W H, ZHANG L, LI S L, LI C Y, YANG Y, CHANG J M, CHEN T. Nature, 2022, 601(7891):118-124.
-
[42]
GELLATLY K J, STRASSNER J P, ESSIEN K, REFAT M A, MURPHY R L, COFFIN-SCHMITT A, PANDYA AMIT G, TOVAR-GARZA A, FRISOLI M L, FAN X L, DING X L, KIM E E, ABBAS Z N, MCDONEL P, GARBER M, HARRIS J E. Sci. Transl. Med., 2021, 13(610):eabd8995.
-
[43]
LANGAN S M, IRVINE A D, WEIDINGER S. Lancet, 2020, 396(10247):345-360.
-
[44]
GARMHAUSEN D, HAGEMANN T, BIEBER T, DIMITRIOU I, FIMMERS R, DIEPGEN T, NOVAK N A. Allergy, 2013, 68(4):498-506.
-
[45]
PYUN B Y. Allergy, Asthma Immunol. Res., 2015, 7(2):101-105.
-
[46]
RINDLER K, KRAUSGRUBER T, THALER F M, ALKON N, BANGERT C, KURZ H, FORTELNY N, ROJAHN T B, JONAK C, GRISS J, BOCK C, BRUNNER P M. Front. Immunol., 2021, 12:630892.
-
[47]
ALKON N, BAUER W M, KRAUSGRUBER T, GOH I, GRISS J, NGUYEN V, REININGER B, BANGERT C, STAUD C, BRUNNER P M, BOCK C, HANIFFA M, STINGL G. J. Allergy Clin. Immunol., 2022, 149(2):624-639.
-
[48]
PHAN Q M, FINE G M, SALZ L, HERRERA G G, WILDMAN B, DRISKELL I M, DRISKELL R R. eLife, 2020, 9:e60066.
-
[49]
APOSTOLIDIS S A, STIFANO G, TABIB T, RICE L M, MORSE C M, KAHALEH B, LAFYATIS R. Front. Immunol., 2018, 9:02191.
-
[50]
GUERRERO-JUAREZ C F, DEDHIA P H, JIN S Q, RUIZ V R, MA DENNIS, LIU Y C, YAMAGA K, SHESTOVA O, GAY D L, YANG Z X, KESSENBROCK K, NIE Q, PEAR W S, COTSARELIS G, PLIKUS M V. Nat. Commun., 2019, 10:650.
-
[51]
HAENSEL D, JIN S Q, SUN P, CINCO R, DRAGAN M, NGUYEN Q, CANG Z X, GONG Y W, VU R, MACLEAN ADAM L. Cell Rep., 2020, 30(11):3932-3947.
-
[52]
QIE C X, JIANG J W, LIU W M, HU X L, CHEN W T, XIE X X, LIU J. Theranostics., 2020, 10(23):10483-10497.
-
[53]
DENG W W, MA Y B, SU Z, LIU Y F, LIANG P P, HUANG C, LIU X, SHAO J, ZHANG Y, ZHANG K, CHEN J, LI R Y. Mol. Ther. Oncolytics., 2021, 20:105-118.
-
[54]
GAYDOSIK A M, TABIB T, GESKIN L J, BAYAN C A, CONWAY J F, LAFYATIS R, FUSCHIOTTI P. Clin. Cancer Res., 2019, 25(14):4443-4454.
-
[55]
APOSTOLIDIS S A, STIFANO G, TABIB T, RICE L M, MORSE C M, KAHALEH B, LAFYATIS R. Front. Immunol., 2018, 9:2191.
-
[56]
CHENG J B, SEDGEWICK ANDREW J, FINNEGAN A I, HARIRCHIAN P, LEE J, KWON S J, FASSETT M S, GOLOVATO J, GRAY M, GHADIALLY R, LIAO W, PEREZ W B E, MAURO T M, MULLY T, KIM E A, SBITANY H, NEUHAUS I M, GREKIN R C, YU S S, GRAY J W, PURDOM E, PAUS R, VASKE C J, BENZ S C, SONG J S, CHO R J. Cell Rep., 2018, 25(4):871-883.
-
[57]
JERBY-ARNON L, SHAH P, CUOCO M S, RODMAN C, SU M J, MELMS J C, LEESON R, KANODIA A, MEI S L, LIN J R, WANG S, RABASHA B, LIU D, ZHANG G, MARGOLAIS C, ASHENBERG O, OTT P A, BUCHBINDER E I, HAQ R, HODI F S, BOLAND G M, SULLIVAN R J, FREDERICK D T, MIAO B C, MOLL T, FLAHERTY K T, HERLYN M, JENKINS R W, THUMMALAPALLI R, KOWALCZYK M S, CAÑADAS I, SCHILLING B, CARTWRIGHT A N R, LUOMA A M, MALU S, HWU P, BERNATCHEZ C, FORGET M, BARBIE D A, SHALEK A K, TIROSH I, SORGER P K, WUCHERPFENNIG K, VAN A M, SCHADENDORF D, JOHNSON B E, ROTEM A, ROZENBLATT-ROSEN O, GARRAWAY L, YOON C H, IZAR B, REGEV A. Cell, 2018, 175(4):984-997.
-
[58]
ISLAM S, ZEISEL A, JOOST S, LA MANNO G, ZAJAC P, KASPER M, LÖNNERBERG P, LINNARSSON S. Nat. Methods, 2014, 11(2):163-166.
-
[1]
-
-
-
[1]
Yuanchun Pan , Xinyun Lin , Leyi Yang , Wenya Hu , Dekui Song , Nan Liu . Artificial Intelligence Science Practice: Preparation of Electronic Skin by Chemical Vapor Deposition of Graphene. University Chemistry, 2025, 40(11): 272-280. doi: 10.12461/PKU.DXHX202412052
-
[2]
Weiwei Zhang , Yongxin Ren , Hong Zhang , Ke Lu . Current Situation and Quality Improvement Measures of Undergraduate Education in Modern Analytical Testing Technology under the “Learning, Teaching, and Practicing” Trinity Concept. University Chemistry, 2025, 40(10): 78-85. doi: 10.12461/PKU.DXHX202412006
-
[3]
Linghua Chen . 基于双联动“三学”模式的食品专业分析化学教学改革. University Chemistry, 2025, 40(8): 78-91. doi: 10.12461/PKU.DXHX202409095
-
[4]
Shuting Zhuang , Lida Zhao . Teaching through Research: A Comprehensive Experiment on Carbon Quantum Dots from Microplastic Waste. University Chemistry, 2025, 40(10): 217-224. doi: 10.12461/PKU.DXHX202412010
-
[5]
Zijuan LI , Xuan LÜ , Jiaojiao CHEN , Haiyang ZHAO , Shuo SUN , Zhiwu ZHANG , Jianlong ZHANG , Yanling MA , Jie LI , Zixian FENG , Jiahui LIU . Synthesis of visual fluorescence emission CdSe nanocrystals based on ligand regulation. Chinese Journal of Inorganic Chemistry, 2025, 41(2): 308-320. doi: 10.11862/CJIC.20240138
-
[6]
Tinghui AN , Dong XIANG , Jiaqi LI , Jiawei WANG , Shuming YU , Nan WANG , Kedi CAI . Research progress on the application of laser synthesis technology for electrochemical functional materials. Chinese Journal of Inorganic Chemistry, 2025, 41(9): 1731-1754. doi: 10.11862/CJIC.20240412
-
[7]
Yan Su , Xiuyun Wang , Huimin Guo , Yanjuan Zhang , Xinwen Zhang , Yunting Shang , Wenfeng Jiang . To Cultivate Scientific Literacy by Learning, Thinking, Practicing and Understanding, To Utilize the “Smart Eye” Expertise by Integrating of Knowledge and Action: Ideological and Political Construction of Analytical Chemistry Experiment Course. University Chemistry, 2024, 39(2): 196-202. doi: 10.3866/PKU.DXHX202308003
-
[8]
Yumiao Gao , Yixin Chen , Jiaxin Wei , Junjie Yu , Yunxia Wang . Guarding the Kingdom: Skin Allies with Sunscreen for Mutual Protection. University Chemistry, 2024, 39(9): 74-80. doi: 10.12461/PKU.DXHX202404149
-
[9]
Yuping Wei , Yiting Wang , Jialiang Jiang , Jinxuan Deng , Hong Zhang , Xiaofei Ma , Junjie Li . Interdisciplinary Teaching Practice——Flexible Wearable Electronic Skin for Low-Temperature Environments. University Chemistry, 2024, 39(10): 261-270. doi: 10.12461/PKU.DXHX202404007
-
[10]
Ronghui LI . Photocatalysis performance of nitrogen-doped CeO2 thin films via ion beam-assisted deposition. Chinese Journal of Inorganic Chemistry, 2025, 41(6): 1123-1130. doi: 10.11862/CJIC.20240440
-
[11]
Mi Wen , Baoshuo Jia , Yongqi Chai , Tong Wang , Jianbo Liu , Hailong Wu . Improvement of Fluorescence Quantitative Analysis Experiment: Simultaneous Determination of Rhodamine 6G and Rhodamine 123 in Food Using Chemometrics-Assisted Three-Dimensional Fluorescence Method. University Chemistry, 2025, 40(4): 390-398. doi: 10.12461/PKU.DXHX202405147
-
[12]
Zhaoyang Li , Haiyan Zhao , Yali Zhang , Yuan Zhang , Shiqiang Cui . Integration of Nobel Prize Achievements in Analytical Technology with College Instrumental Analysis Course. University Chemistry, 2025, 40(3): 269-276. doi: 10.12461/PKU.DXHX202405131
-
[13]
Lin LI , Jiaxue LI , Meixia YANG , Jiayu DING , Jiaqi JING , Ruiping ZHANG . Preparation of mitoxantrone self-assembled carrier-free nanodrugs regulated by sodium acetate for apoptosis induction of human breast carcinoma cells. Chinese Journal of Inorganic Chemistry, 2025, 41(12): 2536-2548. doi: 10.11862/CJIC.20250138
-
[14]
Wenyan Dan , Weijie Li , Xiaogang Wang . The Technical Analysis of Visual Software ShelXle for Refinement of Small Molecular Crystal Structure. University Chemistry, 2024, 39(3): 63-69. doi: 10.3866/PKU.DXHX202302060
-
[15]
Congying Wen , Zhengkun Du , Yukun Lu , Zongting Wang , Hua He , Limin Yang , Jingbin Zeng . Teaching Reform and Practice of Modern Analytical Technology under the Integration of Science, Industry, and Education. University Chemistry, 2024, 39(8): 104-111. doi: 10.3866/PKU.DXHX202312089
-
[16]
Lijun Dong , Pengcheng Du , Guangnong Lu , Wei Wang . Exploration and Practice of Independent Design Experiments in Inorganic and Analytical Chemistry: A Case Study of “Preparation and Composition Analysis of Tetraammine Copper(II) Sulfate”. University Chemistry, 2024, 39(4): 361-366. doi: 10.3866/PKU.DXHX202310041
-
[17]
Jin Tong , Shuyan Yu . Crystal Engineering for Supramolecular Chirality. University Chemistry, 2024, 39(3): 86-93. doi: 10.3866/PKU.DXHX202308113
-
[18]
Xianfei Chen , Wentao Zhang , Haiying Du . Experimental Design of Computational Materials Science Based on Scientific Research Cases. University Chemistry, 2025, 40(3): 52-61. doi: 10.3866/PKU.DXHX202403112
-
[19]
Meiyu Lin , Yuxin Fang , Songzhang Shen , Yaqian Duan , Wenyi Liang , Chi Zhang , Juan Su . Exploration and Implementation of a Dual-Pathway Blended Teaching Model in General Chemistry Experiment Course: A Case Study of Copper Glycine Synthesis and Its Thermal Analysis. University Chemistry, 2024, 39(8): 48-53. doi: 10.3866/PKU.DXHX202312042
-
[20]
Jiarong Feng , Yejie Duan , Chu Chu , Dezhen Xie , Qiu'e Cao , Peng Liu . Preparation and Application of a Streptomycin Molecularly Imprinted Electrochemical Sensor: A Suggested Comprehensive Analytical Chemical Experiment. University Chemistry, 2024, 39(8): 295-305. doi: 10.3866/PKU.DXHX202401016
-
[1]
Metrics
- PDF Downloads(19)
- Abstract views(1112)
- HTML views(256)
Login In
DownLoad: