Citation: QIAN Hai-Cheng, KANWAL Shahid, JIA Qing-Zhu, WANG Qiang, JI Hui-Fen, ZHU Zhi-Chen, XIA Shu-Qian, MA Pei-Sheng. Norm Index-Based Quantitative Structure-Activity Relationship to Predict β-Cyclodextrin Complex Binding Constants[J]. Acta Physico-Chimica Sinica, ;2015, 31(5): 893-898. doi: 10.3866/PKU.WHXB201503193 shu

Norm Index-Based Quantitative Structure-Activity Relationship to Predict β-Cyclodextrin Complex Binding Constants

1.
1 School of Material Science and Chemical Engineering, Tianjin University of Science and Technology, Tianjin 300457, P. R. China;
2 School of Marine Science and Engineering, Tianjin University of Science and Technology, Tianjin 300457, P. R. China;
3 School of Science, Tianjin University of Urban Construction, Tianjin 300384, P. R. China;
4 School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, P. R. China

Received Date: 9 February 2015
Available Online: 19 March 2015
Fund Project: 国家自然科学基金(21306137, U1162104)资助项目 (21306137, U1162104)

Cyclodextrins (CDs) are widely used in the pharmaceutical industry, and the complex stability constant (logK) is an important evaluation target for CD inclusion complexes. In this work, the structures of the inclusion complexes of 233 compounds with β-cyclodextrin (β-CD) were investigated by the quantitative structure-activity relationship (QSAR) method based on a new set of norm indexes proposed by our group. Here, using several arithmetic approaches, a set of QSAR models based on these new norm indexes were developed to predict the logK values of the β-CD complexes. The results showed that all of the norm indexbased- QSAR models could predict logK well, and the best QSAR model was obtained using the least-squares support vector machine method with correlation coefficient (R), leave-one/ten-out validation correlation coefficient (Q_LOO and Q_LTO) values of 0.9587, 0.8775, and 0.8732, respectively. Comparison with other methods suggested that our method performed better for predicting the logK values of β-CD complexes in terms of both accuracy and stability, especially for the discrimination of isomer structures. The results of this and previous studies demonstrate that it might be possible to use the norm index-based model to predict not only the basic physical-chemical properties, but also the chemical reaction-related constants of organic compounds.
- β-cyclodextrin,
- Norm index,
- Complex stability constant,
- Ab initio method,
- Structure-activity relationship
1. [1]
  
  (1) Loftsson, T.; Ducheêne, D. Int. J. Pharm. 2007, 329, 1. doi: 10.1016/j.ijpharm.2006.10.044
2. [2]
  (2) Brewster, M. E.; Loftsson, T. Adv. Drug Deliver Rev. 2007, 59, 645. doi: 10.1016/j.addr.2007.05.012
3. [3]
  (3) Freudenberg, K.; Jacobi, R. Ann. Chem. 1935, 518, 102.
4. [4]
  (4) Larsen, K. L. J. Incl. Phenom. Macrocycl. Chem. 2002, 43, 1. doi: 10.1023/A:1020494503684
5. [5]
  (5) Hsu, C. M.; Tsai, F. J.; Tsai, Y. Carbohyd. Polym. 2014, 114, 115. doi: 10.1016/j.carbpol.2014.07.042
6. [6]
  (6) Vyas, A.; Saraf, S. J. Incl. Phenom. Macrocycl. Chem. 2008, 62, 23. doi: 10.1007/s10847-008-9456-y
7. [7]
  (7) Yang, S. G.; Chen, Q. D.; Shi, J. F.; Shen, X. H. Acta Phys. -Chim. Sin. 2010, 26 (4), 805. [杨士国, 陈庆德, 施建峰, 沈兴海. 物理化学学报, 2010, 26 (4), 805.] doi: 10.3866/PKU.WHXB20100407
8. [8]
  (8) Avdeef, A.; Bendels, S.; Tsinman, O.; Tsinman, K.; Kansy, M. Pharm. Res. 2007, 24, 530. doi: 10.1007/s11095-006-9169-0
9. [9]
  (9) Kim, C.; Park, J. Am. J. Drug Deliv. 2004, 2, 113. doi: 10.2165/00137696-200402020-00004
10. [10]
  (10) Loftsson, T.; Jarho, P.; Masson, M.; Jarvinen, T. Expert Opin. Drug Deliv. 2005, 2, 335. doi: 10.1517/edd.2005.2.issue-2
11. [11]
  (11) Szejtli, J.; Szente, L. Eur. J. Pharm. Biopharm. 2005, 61, 115. doi: 10.1016/j.ejpb.2005.05.006
12. [12]
  (12) Lantz, A.; Rodriguez, M.; Wetterer, S.; Armstrong, D. Anal. Chim. Acta 2006, 557, 184. doi: 10.1016/j.aca.2005.10.005
13. [13]
  (13) Loukas, Y. L. J. Pharm. Biomed. 1997, 275.
14. [14]
  (14) Ogwu, S. O.; Alcala, M. J.; Bhardwaj, R.; Blanchard, J. J. Pharm. Biomed. Anal. 1999, 19, 391. doi: 10.1016/S0731-7085(98)00139-3
15. [15]
  (15) Chen, J.; Ohnmacht, C. M.; Hage, D. S. J. Chromatogr. A 2004, 1033, 115. doi: 10.1016/j.chroma.2004.01.032
16. [16]
  (16) Rundlett, K. L.; Armstrong, D.W. J. Chromatogr. A 1996, 721, 173. doi: 10.1016/0021-9673(95)00774-1
17. [17]
  (17) Berglund, J.; Cedergren, L.; Andersson, S. B. Int. J. Pharm. 1997, 156, 195. doi: 10.1016/S0378-5173(97)00203-2
18. [18]
  (18) Bellini, M. S.; Deyl, Z.; Manetto, G.; Kohlìcková, M. J. Chromatogr. A 2001, 924, 483. doi: 10.1016/S0021-9673(01)00775-0
19. [19]
  (19) Junquera, E.; Aicart, E. J. Phys. Chem. B 1997, 101, 7163. doi: 10.1021/jp963977s
20. [20]
  (20) Ono, N.; Hirayama, F.; Uekama, K. Eur. J. Pharm. Sci. 1999, 8, 133. doi: 10.1016/S0928-0987(99)00002-0
21. [21]
  (21) Cirri, M.; Maestrelli, F.; Orlandini, S.; Furlanetto, S.; Pinzauti, S.; Mura, P. J. Pharm. Biomed. Anal. 2005, 37, 995. doi: 10.1016/j.jpba.2004.09.044
22. [22]
  (22) Faucci, M. T.; Melani, F.; Mura, P. Chem. Phys. Lett. 2002, 358, 383. doi: 10.1016/S0009-2614(02)00410-4
23. [23]
  (23) Melani, F.; Mura, P.; Adamo, M.; Maestrelli, F.; Gratteri, P.; Bonaccini, C. Chem. Phys. Lett. 2003, 370, 280. doi: 10.1016/S0009-2614(03)00126-X
24. [24]
  (24) Loukas, Y. L.; Vraka, V.; Gre riadis, G. Int. J. Pharm. 1996, 144, 225. doi: 10.1016/S0378-5173(96)04759-X
25. [25]
  (25) Pérez-Garrido, A.; Helguera, A. M.; Guillén, A. A.; Cordeiro, M. N. D. S.; Escudero, A. G. Bioorg. Med. Chem. 2009, 17, 896. doi: 10.1016/j.bmc.2008.11.040
26. [26]
  (26) Wang, Q.; Jia, Q. Z.; Yan, L. H.; Xia, S. Q.; Ma, P. S. Chemosphere 2014, 2, 30.
27. [27]
  (27) Zhu, Z. C.; Wang, Q.; Jia, Q. Z.; Xia, S. Q.; Ma, P. S. Acta Phys. -Chim. Sin. 2014, 30 (6), 1086. [朱志臣, 王强, 贾青竹, 夏淑倩, 马沛生. 物理化学学报, 2014, 30 (6), 1086.] doi: 10.3866/PKU.WHXB201404161
28. [28]
  (28) Zhu, Z. C.; Wang, Q.; Jia, Q. Z.; Tang, H. M.; Ma, P. S. Acta Phys. -Chim. Sin. 2013, 29 (1), 30. [朱志臣, 王强, 贾青竹, 汤红梅, 马沛生. 物理化学学报, 2013, 29 (1), 30.] doi: 10.3866/PKU.WHXB201210265
29. [29]
  (29) Hyperchem. 7.0. Hypercube, Inc.: Gainesville, Florida. http://www.hyper.com.
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