Synthesis, Crystal Structures, and Binding Behaviors with CT-DNA/BSA, Antimicrobial and Cytotoxic Activities of Three New Pyrazine Acylhydrazones
- Corresponding author: Xiang-Rong LIU, liuxiangrongxk@163.com
Citation:
Jie YANG, Xiang-Rong LIU, Geng-Hui LIAO, Ming-Kun YU, Zai-Wen YANG, Shun-Sheng ZHAO. Synthesis, Crystal Structures, and Binding Behaviors with CT-DNA/BSA, Antimicrobial and Cytotoxic Activities of Three New Pyrazine Acylhydrazones[J]. Chinese Journal of Structural Chemistry,
;2020, 39(9): 1639-1654.
doi:
10.14102/j.cnki.0254-5861.2011-2770
Sedighipoor, M.; Kianfar, A. H.; Sabzalian, M. R.; Abyar, F. Synthesis and characterization of new unsymmetrical Schiff base Zn(II) and Co(II) complexes and study of their interactions with bovine serum albumin and DNA by spectroscopic techniques. Spectrochim. Acta Part A 2018, 98, 38−50.
Salimon, J.; Salih, N.; Yousif, E.; Hameed, A.; Ibraheem, H. Synthesis, characterization and biological activity of Schiff bases of 2, 5-dimercapto-1, 3, 4-thiadiazole. Aust. J. Basic Appl. Sci. 2010, 4, 2016–2021.
Saini, D.; Gupta, M. Hydrazones as potential anticancer agents: an update. Asian J. Pharm. Pharmacol. 2018, 4, 116–122.
doi: 10.31024/ajpp.2018.4.2.4
Kandile, N. G.; Mohamed, M. I.; Ismaeel, H. M. Synthesis of new Schiff bases bearing 1, 2, 4-triazole, thiazolidine and chloroazetidine moieties and their pharmacological evaluation. J. Enzyme Inhib. Med. Chem. 2017, 32, 119–129.
doi: 10.1080/14756366.2016.1238365
El-Sayed, H. A.; Moustafa, A. H.; El-Moneim, M. A.; Awad, H.; Esmat, M. A. Synthesis of new Schiff bases bearing 1, 2, 4-triazole, thiazolidine and chloroazetidine moieties and their pharmacological evaluation. J. Pharm. Appl. Chem. 2018, 4, 125−131.
doi: 10.18576/jpac/040207
Pan, X. Q.; Huang, S. S.; Wang, F.; Fan, H.; Leng, H.; Zhang, H. L.; Diao, Y. P. Synthesis, crystal structure and antibacterial activity of two hydrazones derived from 2-fluorobenzhydrazide. Chin. J. Struct. Chem. 2013, 1, 142−148.
Abdelrahmana, M. A.; Salamab, I.; Gomaab, M. S.; Elaasserc, M. M.; Abdel-Azizc, M. M.; Soliman, D. H. Design, synthesis and 2D QSAR study of novel pyridine and quinolone hydrazone derivatives as potential antimicrobial and antitubercular agents. Eur. J. Med. Chem. 2017, 138, 698−714.
doi: 10.1016/j.ejmech.2017.07.004
Kumar, P.; Kadyan, K.; Duhan, M.; Sindhu, J.; Singh, V.; Saharan, B. S. Design, synthesis, conformational and molecular docking study of some novel acyl hydrazone based molecular hybrids as antimalarial and antimicrobial agents. Chem. Cent. J. 2017, 11, 115−128.
doi: 10.1186/s13065-017-0344-7
Nagender, P.; Kumar, R. N.; Reddy, G. M.; Swaroop, D. K.; Poornachandra, Y.; Kumar, C. G.; Narsaiah, B. Synthesis of novel hydrazone and azole functionalized pyrazolo[3, 4-b]pyridine derivatives as promising anticancer agents. Bioorg. Med. Chem. Lett. 2016, 26, 4427−4432.
doi: 10.1016/j.bmcl.2016.08.006
Elshaflu, H.; Todorovic, T. R.; Nikolic, M.; Lolic, A.; Višnjevac, A.; Hagenow, S.; Padrón, J. M.; García-Sosa, A. T.; Djordjevic´, I. S.; Grubišic´, S.; Stark, H.; Filipovic´, N. R. Selenazolyl-hydrazones as novel selective MAO inhibitors with antiproliferative and antioxidant activities: experimental and in-silico studies. Front. Chem. 2018, 6, 247−265.
doi: 10.3389/fchem.2018.00247
Hamdan, F.; Bigdeli, Z.; Balalaie, S.; Sewald, N.; Michalek, C. Efficient synthesis of novel RGD based peptides and the conjugation of the pyrazine moiety to their N-terminus. New J. Chem. 2019, 43, 2702−2709.
doi: 10.1039/C8NJ04874F
Racané, L.; Pavelić, S. K.; Ratkaj, I.; Stepani, V.; Paveli, K.; Tralic-Kulenovi, V.; Karminski-Zamola, G. Synthesis and antiproliferative evaluation of some new amidino-substituted bis-benzothiazolyl-pyridines and pyrazine. Eur. J. Med. Chem. 2012, 55, 108−116.
doi: 10.1016/j.ejmech.2012.07.005
Li, Y. F.; Wei, X.; Bai, S.; Xu, Z. G.; Lv, M. L. One-pot synthesis of benzimidazole-pyrazines and their anticancer activities. J. Heterocycl. Chem. 2019, 56, 3429−3434.
doi: 10.1002/jhet.3701
Bonde, C. G.; Gaikwad, N. J. Synthesis and preliminary evaluation of some pyrazine containing thiazolines and thiazolidinones as antimicrobial agents. Bioorg. Med. Chem. 2004, 12, 2151−2161.
doi: 10.1016/j.bmc.2004.02.024
Bonde, C.; Nadkarni, B. A.; Khadse, B. G. Synthesis of 2-substituted pyrazine derivatives as antibacterial agents. Indian J. Heterocycl. Chem. 2001, 10, 271−274.
Guo, S.; Xu, M.; Guo, Q.; Zhu, F.; Jiang, X.; Xie, Y.; Shen, J. Discovery of pyrimidine nucleoside dual prodrugs and pyrazine nucleosides as novel anti-HCV agents. Bioorg. Med. Chem. 2019, 27, 748−759.
doi: 10.1016/j.bmc.2019.01.007
Yamaguchi, T.; Ito, S.; Kashige, N.; Nakahara, K.; Harano, K. The relationship between the chemical structures of dihydropyrazine derivatives and DNA strand-breakage activity. Chem. Pharm. Bull. 2007, 55, 532−536.
doi: 10.1248/cpb.55.532
Nanjundan, N.; Selvakumar, P.; Narayanasamy, R.; Haque, R. A.; Velmurugan, K.; Nandhakumar, R.; Silambarasan, T.; Dhandapani, R. Synthesis, structure, DNA/BSA interaction and in vitro cytotoxic activity of nickel(II) complexes derived from S-allyldithiocarbazate. J. Photochem. Photobiol. B 2014, 141, 176−185.
doi: 10.1016/j.jphotobiol.2014.10.009
Zhao, J.; Li, W.; Ma, R.; Chen, S.; Ren, S.; Jiang, T. Design, synthesis and DNA interaction study of new potential DNA bis-intercalators based on glucuronic acid. Int. J. Mol. Sci. 2013, 14, 16851−16865.
doi: 10.3390/ijms140816851
Bera, R.; Sahoo, B. K.; Ghosh, K. S.; Dasgupta, S. Studies on the interaction of isoxazolcurcumin with calf thymus DNA. Int. J. Biol. Macromol. 2008, 42, 14−21.
doi: 10.1016/j.ijbiomac.2007.08.010
Wang, J. K.; Li, B.; Wu, H. P.; Tian, X. Y.; Ma, X. X. Synthesis, crystal structure and DNA-binding property of a Mn(II) complex based on 5-(trifluoromethyl)pyridine-2-carboxylic acid. Chin. J. Struct. Chem. 2019, 38, 1362−1369.
Muhammad, D.; Rabia, A. B.; Muhammad, N. T.; Muhammad, A.; Syeda, T. H. UV assisted preliminary DNA binding studies and single-crystal X-ray structure of 4-{(4-nitrophenylsulfonamido)methyl}cyclohexanecarboxylic acid. Chin. J. Struct. Chem. 2017, 36, 745−750.
Flarakos, J.; Morand, K. L.; Vouros, P. High-throughput solution-based medicinal library screening against human serum albumin. Anal. Chem. 2005, 77, 1345−1353.
doi: 10.1021/ac048685z
Chin, L. F.; Kong, S. M.; Seng, H. L.; Khoo, K. S.; Vikneswaran, R.; Teoh, S. G.; Ahmad, M.; Khoo, S. B. A.; Maah, M. J. C.; Ng, H. Synthesis, characterization and biological properties of cobalt(II) complexes of 1, 10-phenanthroline and maltol. J. Inorg. Biochem. 2011, 105, 339−347.
doi: 10.1016/j.jinorgbio.2010.11.018
Sheldrick, G. M. SHELXS-97, Program for X-ray Crystal Structure Solution. University of Göttingen, Germany 1997.
Singhal, S.; Khanna, P.; Khanna, L. Synthesis, DFT studies, molecular docking, antimicrobial screening and UV fluorescence studies on ct-DNA for novel Schiff bases of 2-(1-aminobenzyl) benzimidazole. Heliyon 2019, 5, e02596−10.
doi: 10.1016/j.heliyon.2019.e02596
Zhou, Z. X.; Huang, Q. H.; Zhu, S.; Zhou, L. Establishment of rapid determining method for antibacterial activity by microplate reader. Adv. Microbiol. 2014, 3, 29−35.
doi: 10.12677/AMB.2014.32004
Mohamadi, M.; Ebrahimipour, S. Y.; Castro, J.; Torkzadeh-Mahani, M. Synthesis, characterization, crystal structure, DNA and BSA binding, molecular docking and in vitro anticancer activities of a mononuclear dioxido-uranium(VI) complex derived from a tridentate ONO aroylhydrazone. J. Photochem. Photobiol. , B 2016, 158, 219−227.
doi: 10.1016/j.jphotobiol.2016.03.001
Giorgi, G.; Ponticelli, F.; Savini, L.; Chiasserini, L.; Pellerano, C. On the isomerism/tautomerism of hydrazones. Crystal structures, study in solution and theoretical calculations of new series of α-N-heterocyclic. J. Chem. Soc., Perkin Trans. 2 2000, 11, 2259−2264.
Singh, D. P.; Raghuvanshi, D. S.; Singh, K. N.; Singh, V. P. Synthesis, characterization and catalytic application of some novel binuclear transition metal complexes of bis-(2-acetylthio-phene)oxaloyldihydrazone for C–N bond formation. J. Mol. Catal. A: Chem. 2013, 379, 21−28.
doi: 10.1016/j.molcata.2013.07.011
Mehmood, M.; Din, I.; Tahir, M. N.; Haq, I.; Zahra, S. S. Synthetic stratagem, characterization and biocidal applications of triorganotin(IV) complexes derived from hydrazide/hydrazone analogues. Inorg. Chim. Acta 2019, 486, 387−394.
doi: 10.1016/j.ica.2018.10.009
Kondori, T.; Akbarzadeh-T, N.; Abdi, K.; Dušek, M.; Eigner, V. A novel cadmium(II) complex of bipyridine derivative: synthesis, X-ray crystal structure, DNA binding and antibacterial activities. J. Biomol. Struct. Dyn. 2020, 38, 236−247.
doi: 10.1080/07391102.2019.1570867
Abdi, K.; Hadadzadeh, H.; Salimi, M.; Simpson, J.; Khalaji, A. D. A mononuclear copper(II) complex based on the polypyridyl ligand 2, 4, 6-tris(2-pyridyl)-1, 3, 5-triazine(tptz), [Cu(tptz)2]2+: X-ray crystal structure, DNA binding and in vitro cell cytotoxicity. Polyhedron 2012, 44, 101−112.
doi: 10.1016/j.poly.2012.06.089
Yan, H.; Yang, L.; Chang, G. L.; Li, X.; Niu, M. J. DNA interaction and cytotoxic activity of a chiral amino-alcohol Schiff base derived Cu(Ⅱ) complex. Chin. J. Struct. Chem. 2016, 35, 465−471.
Bei, Q. Synthesis, crystal structure and DNA-binding properties of a new copper(II) Schiff base complex. Chin. J. Struct. Chem. 2012, 8, 1187−1193.
Nathalie, D.; Ulrich, J.; Brigitte, B.; Amélie, L.; Jean-François, G.; Christian, B.; Sylvain, R.; Jean-Yves, M. Synthesis of 2, 6-diphenylpyrazine derivatives and their DNA binding and cytotoxic properties. Eur. J. Med. Chem. 2005, 40, 1206−1213.
doi: 10.1016/j.ejmech.2005.07.003
Yang, J.; Liu, X. R.; Yue, W. S.; Yang, Z. W.; Zhao, S. S.; Yang, Z. Crystal structures, thermal behaviors and biological activities of acylhydrazone compounds containing pyrazine rings and halogen atoms. Chin. J. Struct. Chem. 2018, 37, 248−261.
Zhang, N.; Fan, Y. H.; Bi, C. F.; Zhao, Y.; Zhang, X.; Zhang, D. M.; Huang, G. M. Nickel(II) complexes with Schiff bases derived from 2-acetylpyrazine and tryptophan: synthesis, crystal structures and DNA interactions. Transition Met. Chem. 2013, 38, 463−471.
doi: 10.1007/s11243-013-9712-x
Zhang, X. M.; Ou, Z. B.; Chen, S.; Xiong, Y. H.; Zhou, X. H.; Liu, H. F.; Le, X. Y. Synthesis, crystal structure and DNA-binding properties of copper(II) complex with 6-(pyrazin-2΄-yl)-1, 3, 5-triazine-2, 4-diamine and glycinate. Chin. J. Inorg. Chem. 2012, 28, 2667−2673.
Zhang, Y. L.; Zhang, X.; Fei, X. C.; Wang, S. L.; Gao, H. W. Binding of bisphenol A and acrylamide to BSA and DNA: insights into the comparative interactions of harmful chemicals with functional biomacromolecules. J. Hazard. Mater. 2010, 182, 877−885.
doi: 10.1016/j.jhazmat.2010.06.131
Popova, E. A.; Protas, A. V.; Mukhametshina, A. V.; Ovsepyan, G. K.; Suezov, R. V.; Eremin, A. V.; Stepchenkova, E. I.; Tarakhovskaya, E. R.; Fonin, A. V.; Starova, G. L.; Mikolaichuk, O. V.; Porozov, Y. B.; Gureev, M. A.; Trifonov, R. E. Synthesis, biological evaluation and molecular docking studies on the DNA and BSA binding interactions of palladium(II) and platinum(II) complexes featuring amides of tetrazol-1-yl- and tetrazol-5-ylacetic acids. Polyhedron 2019, 158, 36−46.
doi: 10.1016/j.poly.2018.10.038
Mishra, M.; Tiwari, K.; Shukla, S.; Mishra, R.; Singh, V. P. Synthesis, structural investigation, DNA and protein binding study of some 3d-metal complexes with N′-(phenyl-pyridin-2-yl-methylene)-thiophene-2-carboxylic acid hydrazide. Spectrochim. Acta Part A 2014, 132, 452−464.
doi: 10.1016/j.saa.2014.05.007
Wang, J.; Liu, L. J.; Liu, B.; Guo, Y.; Zhang, Y. Y.; Xu, R.; Wang, S. X.; Zhang, X. D. Spectroscopic study on interaction of bovine serum albumin with sodium magnesium chlorophyllin and its sonodynamic damage under ultrasonic irradiation. Spectrochim. Acta Part A 2010, 75, 366−374.
doi: 10.1016/j.saa.2009.10.042
Tolosa, L.; Gryczynski, I.; Eichhorn, L. R.; Dattelbaum, J. D.; Castellano, F. N.; Rao, G.; Lakowicz, J. R. Glucose sensor for low-cost lifetime-based sensing using a genetically engineered protein. Anal. Biochem. 1999, 267, 114−120.
doi: 10.1006/abio.1998.2974
Teng, Y.; Liu, R. T.; Li, C.; Xia, Q.; Zhang, P. J. The interaction between 4-aminoantipyrine and bovine serum albumin: multiple spectroscopic and molecular docking investigations. J. Hazard. Mater. 2011, 190, 574−581.
doi: 10.1016/j.jhazmat.2011.03.084
Mandal, G.; Bardhan, M.; Ganguly, T. Interaction of bovine serum albumin and albumin-gold nanoconjugates with l-aspartic acid. A spectroscopic approach. Colloids Surf. B 2010, 81, 178−184.
doi: 10.1016/j.colsurfb.2010.07.002
Protas, A. V.; Popova, E. A.; Mikolaichuk, O. V.; Porozov, Y. B.; Mehtiev, A. R.; Ott, I.; Alekseev, G. V.; Kasyanenko, N. A.; Trifonov, R. E. Synthesis, DNA and BSA binding of Pd(II) and Pt(II) complexes featuring tetrazolylacetic acids and their esters. Inorg. Chim. Acta 2018, 473, 133−144.
doi: 10.1016/j.ica.2017.12.040
Yao HUANG , Yingshu WU , Zhichun BAO , Yue HUANG , Shangfeng TANG , Ruixue LIU , Yancheng LIU , Hong LIANG . Copper complexes of anthrahydrazone bearing pyridyl side chain: Synthesis, crystal structure, anticancer activity, and DNA binding. Chinese Journal of Inorganic Chemistry, 2025, 41(1): 213-224. doi: 10.11862/CJIC.20240359
Jia JI , Zhaoyang GUO , Wenni LEI , Jiawei ZHENG , Haorong QIN , Jiahong YAN , Yinling HOU , Xiaoyan XIN , Wenmin WANG . Two dinuclear Gd(Ⅲ)-based complexes constructed by a multidentate diacylhydrazone ligand: Crystal structure, magnetocaloric effect, and biological activity. Chinese Journal of Inorganic Chemistry, 2025, 41(4): 761-772. doi: 10.11862/CJIC.20240344
Lu LIU , Huijie WANG , Haitong WANG , Ying LI . Crystal structure of a two-dimensional Cd(Ⅱ) complex and its fluorescence recognition of p-nitrophenol, tetracycline, 2, 6-dichloro-4-nitroaniline. Chinese Journal of Inorganic Chemistry, 2024, 40(6): 1180-1188. doi: 10.11862/CJIC.20230489
Lulu DONG , Jie LIU , Hua YANG , Yupei FU , Hongli LIU , Xiaoli CHEN , Huali CUI , Lin LIU , Jijiang WANG . Synthesis, crystal structure, and fluorescence properties of Cd-based complex with pcu topology. Chinese Journal of Inorganic Chemistry, 2025, 41(4): 809-820. doi: 10.11862/CJIC.20240171
Xiumei LI , Yanju HUANG , Bo LIU , Yaru PAN . Syntheses, crystal structures, and quantum chemistry calculation of two Ni(Ⅱ) coordination polymers. Chinese Journal of Inorganic Chemistry, 2024, 40(10): 2031-2039. doi: 10.11862/CJIC.20240109
Xiumei LI , Linlin LI , Bo LIU , Yaru PAN . Syntheses, crystal structures, and characterizations of two cadmium(Ⅱ) coordination polymers. Chinese Journal of Inorganic Chemistry, 2025, 41(3): 613-623. doi: 10.11862/CJIC.20240273
Chao LIU , Jiang WU , Zhaolei JIN . Synthesis, crystal structures, and antibacterial activities of two zinc(Ⅱ) complexes bearing 5-phenyl-1H-pyrazole group. Chinese Journal of Inorganic Chemistry, 2024, 40(10): 1986-1994. doi: 10.11862/CJIC.20240153
Xiaoxia WANG , Ya'nan GUO , Feng SU , Chun HAN , Long SUN . Synthesis, structure, and electrocatalytic oxygen reduction reaction properties of metal antimony-based chalcogenide clusters. Chinese Journal of Inorganic Chemistry, 2024, 40(6): 1201-1208. doi: 10.11862/CJIC.20230478
Xiaoling WANG , Hongwu ZHANG , Daofu LIU . Synthesis, structure, and magnetic property of a cobalt(Ⅱ) complex based on pyridyl-substituted imino nitroxide radical. Chinese Journal of Inorganic Chemistry, 2025, 41(2): 407-412. doi: 10.11862/CJIC.20240214
Yan XU , Suzhi LI , Yan LI , Lushun FENG , Wentao SUN , Xinxing LI . Structure variation of cadmium naphthalene-diphosphonates with the changing rigidity of N-donor auxiliary ligands. Chinese Journal of Inorganic Chemistry, 2025, 41(2): 395-406. doi: 10.11862/CJIC.20240226
Kaimin WANG , Xiong GU , Na DENG , Hongmei YU , Yanqin YE , Yulu MA . Synthesis, structure, fluorescence properties, and Hirshfeld surface analysis of three Zn(Ⅱ)/Cu(Ⅱ) complexes based on 5-(dimethylamino) isophthalic acid. Chinese Journal of Inorganic Chemistry, 2024, 40(7): 1397-1408. doi: 10.11862/CJIC.20240009
Huan ZHANG , Jijiang WANG , Guang FAN , Long TANG , Erlin YUE , Chao BAI , Xiao WANG , Yuqi ZHANG . A highly stable cadmium(Ⅱ) metal-organic framework for detecting tetracycline and p-nitrophenol. Chinese Journal of Inorganic Chemistry, 2024, 40(3): 646-654. doi: 10.11862/CJIC.20230291
Ruikui YAN , Xiaoli CHEN , Miao CAI , Jing REN , Huali CUI , Hua YANG , Jijiang WANG . Design, synthesis, and fluorescence sensing performance of highly sensitive and multi-response lanthanide metal-organic frameworks. Chinese Journal of Inorganic Chemistry, 2024, 40(4): 834-848. doi: 10.11862/CJIC.20230301
Meirong HAN , Xiaoyang WEI , Sisi FENG , Yuting BAI . A zinc-based metal-organic framework for fluorescence detection of trace Cu2+. Chinese Journal of Inorganic Chemistry, 2024, 40(8): 1603-1614. doi: 10.11862/CJIC.20240150
Shuyan ZHAO . Field-induced CoⅡ single-ion magnet with pentagonal bipyramidal configuration. Chinese Journal of Inorganic Chemistry, 2024, 40(8): 1583-1591. doi: 10.11862/CJIC.20240231
Yinling HOU , Jia JI , Hong YU , Xiaoyun BIAN , Xiaofen GUAN , Jing QIU , Shuyi REN , Ming FANG . A rhombic Dy4-based complex showing remarkable single-molecule magnet behavior. Chinese Journal of Inorganic Chemistry, 2025, 41(3): 605-612. doi: 10.11862/CJIC.20240251
Guangyao Wang , Zhitong Xu , Ye Qi , Yueguang Fang , Guiling Ning , Junwei Ye . Electrospun nanofibrous membranes with antimicrobial activity for air filtration. Chinese Chemical Letters, 2024, 35(10): 109503-. doi: 10.1016/j.cclet.2024.109503
Guo-Ping Yin , Ya-Juan Li , Li Zhang , Ling-Gao Zeng , Xue-Mei Liu , Chang-Hua Hu . Citrinsorbicillin A, a novel homotrimeric sorbicillinoid isolated by LC-MS-guided with cytotoxic activity from the fungus Trichoderma citrinoviride HT-9. Chinese Chemical Letters, 2024, 35(8): 109035-. doi: 10.1016/j.cclet.2023.109035
Xiaofen GUAN , Yating LIU , Jia LI , Yiwen HU , Haiyuan DING , Yuanjing SHI , Zhiqiang WANG , Wenmin WANG . Synthesis, crystal structure, and DNA-binding of binuclear lanthanide complexes based on a multidentate Schiff base ligand. Chinese Journal of Inorganic Chemistry, 2024, 40(12): 2486-2496. doi: 10.11862/CJIC.20240122
Jian Song , Shenghui Wang , Qiuge Liu , Xiao Wang , Shuo Yuan , Hongmin Liu , Saiyang Zhang . N-Benzyl arylamide derivatives as novel and potent tubulin polymerization inhibitors against gastric cancers: Design, structure–activity relationships and biological evaluations. Chinese Chemical Letters, 2025, 36(2): 109678-. doi: 10.1016/j.cclet.2024.109678