Synthesis, structural characterization, bio-activity, and density functional theory calculation on Cu(Ⅱ) complexes with hydrazone-based Schiff base ligands

Maitri Bhattacharjee Rekha Boruah Smriti R. N. Dutta Purkayastha Waldemar Maniukiewicz Shubhamoy Chowdhury Debasish Maiti Tamanna Akhtar

Citation:  Maitri Bhattacharjee, Rekha Boruah Smriti, R. N. Dutta Purkayastha, Waldemar Maniukiewicz, Shubhamoy Chowdhury, Debasish Maiti, Tamanna Akhtar. Synthesis, structural characterization, bio-activity, and density functional theory calculation on Cu(Ⅱ) complexes with hydrazone-based Schiff base ligands[J]. Chinese Journal of Inorganic Chemistry, 2024, 40(7): 1409-1422. doi: 10.11862/CJIC.20240007 shu

腙基席夫碱配体铜(Ⅱ)配合物的合成、结构表征、生物活性和密度泛函理论计算

    通讯作者: Dutta PurkayasthaR. N., rndp09@gmail.com; rndp@tripurauniv.ac.in
摘要: 以甲醇为介质, 合成了3种新的席夫碱配体HL1(2-hydroxybenzaldehyde2-(2-oxo-1, 2-diphenylethylidene)hydrazone)、HL2(4-hydroxybenzaldehyde2-(2-oxo-1, 2-diphenylethylidene)hydrazone)和L3(2-methoxybenzaldehyde2-(2-oxo-1, 2-diphenylethylidene)hydrazone)的Cu(Ⅱ)配合物1~3。通过元素分析、光谱方法、磁化率测量和密度泛函理论(DFT)计算对配合物进行了表征。通过单晶X射线衍射研究对合成的配体进行了结构表征。通过DFT计算确定了配合物的优化结构。通过紫外可见吸收光谱和荧光发射光谱研究了配合物与小牛胸腺DNA(CT-DNA)的结合能力。吸收光谱研究揭示了增色效应, 并提出了与CT-DNA相互作用的可能模式。溴化乙锭(EB)竞争结合研究表明, 配合物可以取代DNA-EB加合物中的DNA, 且配合物可能以嵌入模式与CT-DNA结合。配合物对革兰氏阴性肺炎克雷伯菌、大肠杆菌、鲍氏志贺菌和革兰氏阳性金黄色葡萄球菌的体外抗菌活性研究表明, 配合物2对肺炎克雷伯菌和鲍氏志贺菌具有明显抗菌活性, 但配合物13没有表现出任何显著的抗菌活性。

English

  • Schiff bases are flexible imine ligands, their intrinsic properties originated from the ease of synthesis, wide-ranging complexing ability, structural diversities, and host of applications in different spheres[1-4]. This ligand system played a vital role in the areas of coordination chemistry, bioinorganic chemistry, catalysis, material chemistry, sensor technology, and many other fields[5-10]. The N, O donor Schiff base ligands have been widely studied due to their high coordinating ability to metal, and the resultant complexes exhibit significant structural diversities, catalytic activities, and unusual magnetic properties[11-13]. The chemistry of transition metal Schiff base compounds has been a recurrent theme, still, the interest in this area continues unabated as many of these complexes show fascinating structural features, and interesting photochemical, electrochemical, fluorescence, non-linear optical, and magnetic properties[14-16]. Such complexes also find potential use in magnetic materials, electronic devices, model compounds for important bioprocesses, and as catalysts in many organic transformations[17-20]. Apart from these, metal Schiff base compounds are also important due to their relevance in the study of interactions with DNA, and in several important biological processes[21]. The hydrazone-based Schiff base ligands are considered to be versatile multidentate ligands, able to coordinate with a host of metal ions[22]. This ligand system and its metal complexes show prominent DNA binding, cleavage ability, and therapeutic as well as catalytic properties[23]. Among the 3d transition metals, the complexes of Cu(Ⅱ) with Schiff bases are widely studied not only due to their ease of synthesis, possible applications in areas of catalysis, therapeutics, magnetic materials, etc. but also because many of them are used in mimicking the activity of several metalloenzymes[24-25].

    Considering the immense importance of metal-Schiff base complexes as highlighted, we were interested in exploring Cu(Ⅱ)-Schiff base chemistry and endeavoured to synthesize newer hydrazone-based Schiff base complexes of Cu(Ⅱ) to ascertain some of their properties. The present report deals with the synthesis, characterization, and structure elucidation of hydrazone-based Schiff base complexes of Cu(Ⅱ) ion. To evaluate the biological potential of synthesized Cu(Ⅱ)-Schiff base complexes, their DNA binding ability and antibacterial activity were explored.

    Reagent-grade chemicals were used. Calf thymus DNA (CT-DNA), tris(hydroxymethylaminomethane) hydrochloride (Tris-HCl), ethidium bromide (EB), dimethyl sulfoxide (DMSO), and other chemicals used were analytical grade products and acquired from Sigma-Aldrich. The instruments used for recording FTIR and electronic spectra were Bruker Alpha Ⅱ FTIR spectrophotometer and Shimadzu 1800 spectro-photometer. Magnetic susceptibility was measured by the Gouy method using Hg[Co(SCN)4] as standard. Fluorescence spectra were recorded on Fluorolog-3, Horiba Scientific Fluorescence spectrophotometer. C, H, and N contents in the obtained compounds were ascertained using a Perkin Elmer CHN analyzer (2400 series Ⅱ). The copper content in the compounds was determined by iodometric titration.

    To a methanolic solution (20 mL) of benzil (2.102 3 g, 10 mmol), hydrazine hydrate (0.500 6 g, 10 mmol) was added in small proportions. The solution was stirred for an hour when a white precipitate separated. Precipitated, benzil monohydrazone was collected by filtration, and washed with hexane several times to remove unreacted benzil. The ligands HL1, HL2, L3 were obtained by treating the freshly prepared benzil monohydrazone (0.224 2 g, 1 mmol) dissolved in methanol with 2-hydroxy benzaldehyde (0.122 1 g, 1 mmol) (HL1)/4-hydroxy benzaldehyde (0.122 1 g, 1 mmol) (HL2)/2-methoxy benzaldehyde (0.1361 g, 1 mmol) (L3) under reflux at 90 ℃. Yellow crystalline compounds were obtained from the clear solution within 4-5 d. The single crystals suitable for X-ray crystallography were separated, washed with methanol, and dried in vacuo.

    HL1. Yield: 70%. Anal. Calcd. For C21H16O2N2(%): C, 76.82; H, 4.87; N, 8.53. Found(%): C, 75.29; H, 4.60; N, 8.48. FTIR (KBr, cm-1): 1 604 ν(C=O), 1 673 ν(C=N), 1 231 ν(C—O), 3 424 ν(O—H).

    HL2. Yield: 73.45%. Anal. Calcd. For C21H16O2N2(%): C, 76.82; H, 4.87; N, 8.53. Found(%): C, 76.95; H, 4.82; N, 8.21. FTIR (KBr, cm-1): 1 557 ν(C=O), 1 602 ν(C=N), 1 162 ν(C—O), 3424 ν(O—H).

    L3. Yield: 66.07%. Anal. Calcd. For C22H18O2N2(%): C, 77.19; H, 5.26; N, 8.18. Found(%): C, 77.21; H, 5.45; N, 8.15. FTIR (KBr, cm-1): 1 598 ν(C=O), 1 673 ν(C=N), 1 230 ν(C—O).

    The ligand HL1 (0.328 4 g, 1 mmol) was dissolved in 20 mL DMF to which a solution of copper acetate (0.199 6 g, 1 mmol) in DMF (10 mL) was added and the resulting solution was stirred at room temperature for 3-4 h. The green solution so obtained was filtered and left undisturbed at room temperature from which the microcrystalline product of complex [Cu(L1)2] (1) was separated within 6-7 d. The complexes, [Cu(HL2)2(Ac)2](2) and [Cu(L3)2(Ac)2](3) were prepared by following the same synthetic protocol. The ligand HL2 (0.328 4 g, 1 mmol)/L3 (0.342 4 g, 1 mmol) reacted with Cu acetate monohydrate (0.199 6 g, 1 mmol) in DMF-water (1∶1, V/V), and the mixture was stirred for 5-6 h at room temperature, which afforded green microcrystalline products. The complexes were collected by filtration and washed several times with DMF followed by ethanol and dried in vacuo.

    [Cu(L1)2] (1). Yield: 63.21%. Anal. Calcd. For C42H30CuN4O4(%): C, 69.96; H, 4.44; N, 7.77; Cu, 8.81. Found(%): C, 69.79; H, 4.71; N, 7.96; Cu, 9.03. FTIR (KBr, cm-1): 1 612 ν(C=O), 1 670 ν(C=N), 1 222 ν(C—O), 486 ν(Cu—N), 428-415 ν(Cu—O).

    [Cu(HL2)2(Ac)2] (2).Yield: 69.81%. Anal. Calcd. For C46H38CuN4O8(%): C, 65.84; H, 4.53; N, 6.68; Cu, 7.57. Found(%): C, 65.51; H, 4.43; N, 6.87; Cu, 7.76. FTIR (KBr, cm-1): 1 605 νas(COO-), 1557-1600 νs(COO-), 1 557 ν(C=O), 1 557-1 600 ν(C=N), 3428 ν(O—H), 486 ν(Cu—N), 428-415 ν(Cu—O).

    [Cu(L3)2(Ac)2] (3). Yield: 72.21%. Anal. Calcd. For C48H42CuN4O8(%): C, 66.50; H, 5.01; N, 6.47; Cu, 7.33. Found(%): C, 66.89; H, 4.86; N, 6.33; Cu, 7.12. FTIR (KBr, cm-1): 1 600 νas(COO-), 1 350 νs(COO-), 1 600 ν(C=O), 1 669 ν(C=N), 486 ν(Cu—N), 428-415 ν(Cu—O).

    Single crystal X-ray diffraction data was recorded by the ω-scan technique using Cu (λ =0.154 184 nm) or Mo (λ=0.071 073 nm). The crystallographic studies of HL1, HL2, and L3 were conducted at 100 K using RIGAKU XtaLAB Synergy, Dualflex, and Pilatus 300K diffraction instruments along with Photon Jet micro-focus X-ray for source data collection, cell refinement, data reduction, and absorption correction were carried out using CrysAlis PRO software. The crystal structures were solved using the SHELXT 2018/2 program. Atomic scattering factors were taken from the International Tables for X-ray Crystallography. Positional coordinates of non-H-atoms were refined using the full-matrix least-squares method on F2 with anisotropic thermal parameters by using the SHELXL 2018/3 program. All hydrogen atoms have been found in the difference electron density maps. The hydrogens bonded to carbon atoms were placed in calculated positions of (C—H: 0.093-0.098 nm), further included in the refinement as riding contributions with isotropic displacement parameters which were set to 1.2 times the Ueq of the parent atom. The H atoms of the phenolic—OH group were placed at a distance of O—H (0.806 nm) and then were refined without any restrictions. Molecular graphics were obtained by using the Mercury 2020.2.0 program. The details of the crystallographic data and refinement parameters are depicted in Table 1.

    Table 1

    Table 1.  Crystal data and structure refinement parameters for the ligands
    下载: 导出CSV
    Parameter HL1 HL2 L3
    Empirical formula C21H16N2O2 C21H16N2O2 C22H18N2O2
    Formula weight 328.36 328.36 342.38
    Crystal system Monoclinic Orthorhombic Monoclinic
    Space group P21/c Fdd2 P21/n
    a/nm 1.688 86(8) 3.028 83(4) 1.546 51(3)
    b/nm 0.909 79(3) 2.761 76(9) 0.782 50(1)
    c/nm 1.107 49(3) 0.803 612(18) 1.585 04(3)
    β/(°) 99.377(3) 114.056(2)
    Volume/nm3 1.971 55(7) 6.722 1(3) 1.75153(6)
    Z 4 16 4
    Dc/(Mg·m-3) 1.299 1.298 1.298
    Absorption coefficient/mm-1 0.680 0.679 0.084
    F(000) 688 2 752 720
    Crystal size/mm 0.09×0.43×0.52 0.60×0.50×0.46 0.52×0.55×0.55
    θ range for data collection/(°) 2.7-66.6 4.3-66.6 2.8-25.0
    Index ranges -20 ≤ h ≤ 20; -36 ≤ h ≤ 30; -18 ≤ h ≤ 18;
    -10 ≤ k ≤ 10; -32 ≤ k ≤ 32; -9 ≤ k ≤ 9;
    -13 ≤ l ≤ 13 -9 ≤ l ≤ 9 -18 ≤ l ≤ 18
    Reflection collected 59 891 40 530 45 286
    Independent reflection 2 961 2 962 2 978
    Goodness of fit on F2 1.05 1.09 1.06
    R indices (all data) 0.030 8 0.021 3 0.029 2
    Largest diff. peak and hole/(e·nm-3) 190 and -140 130 and -120 220 and -150

    The Gaussian 09 Revision C.01 program package was used for all calculations. The gas phase geometries of the molecular species (1, 2, 3) were optimized fully by unrestricting symmetry in singlet ground states with B3LYP functionals. The basis set LANL2DZ with effective core potential (ECP) was employed for Cu following the associated valence double ζ basis set of Hay and Wadt.

    1.6.1   Preparation of stock solution

    The CT-DNA stock solution was prepared by dissolving a suitable amount of CT-DNA in tris(hydroxy-methylaminomethane)hydrochloride (Tris-HCl) buffer (0.01 mol·L-1, pH 7.4) at ambient conditions. An EB (50 µmol·L-1) stock solution was prepared by dissolving an appropriate amount of the dye in deionized double-distilled water. The solutions (1 mmol·L-1) of the complexes were prepared by dissolving them in DMSO.

    1.6.2   Absorption spectroscopy

    The UV-Vis spectroscopic study was carried out on a Shimadzu 1800 spectrophotometer. The DNA binding absorption experiments were performed in a wavelength range of 240-300 nm by the addition of increasing concentration of the solutions of complexes 1-3 (1 mmol·L-1) to a fixed amount of CT-DNA (50 µmol·L-1).

    1.6.3   Emission spectroscopy

    The competitive binding of the complexes with ethidium bromide (EB) was studied by fluorescence spectroscopy. The CT-DNA-EB complex was prepared by adding 20 µmol·L-1 EB and 26 µmol·L-1 CT-DNA in buffer (150 mmol·L-1 NaCl and 15 mmol·L-1 trisodium citrate at pH 7.0). The intercalating effect of complexes 1-3 with the DNA-EB adduct was studied by successive addition of a fixed amount of complex solution to the solution of the DNA-EB system. The changes in the addition of the respective complex to the DNA-EB adduct solution were ascertained by recording the variation in fluorescence spectral emission of the DNA-EB system.

    Antibacterial activity assay was tested on human pathogenic Gram-negative bacteria Klebsiella pneu-moniae (K. pneumoniae), Escherichia coli (E. coli), and Shigella boydii (S. boydii), and gram-positive bacteria Staphylococcus aureus (S. aureus). The strains were tested with complexes 1-3 dissolved in DMSO. Overnight cultured stock bacteria in nutrient broth were used to test the antibacterial efficacy of the complexes. In 100 mm petri dish nutrient agar was poured and after 10 min 50 µL fresh bacterial culture was spread on the agar plate. For determination of the zone of inhibition, 5 mm Whatman filter paper discs were placed on prespread bacteria in a nutrient agar plate. Different concentrations (1, 10, 100 µg in each disc) of the complexes were poured on the discs which were diffused on an agar plate. After 14 h of incubation at 37℃, the clear zone of inhibition was measured by scale. DMSO was used in the measurement as the negative control.

    The strategy involved in the synthesis of the ligands consists of two steps. Condensation of benzil with hydrazinehydrate in equimolar proportion resulted in the formation of benzil monohydrazone which was further condensed separately with aldehydes viz. salicylaldehyde, 4-hydroxy benzaldehyde, and 2-methoxy benzaldehyde to obtain hydrazone-based Schiff base ligands abbreviated as HL1, HL2 and L3. The synthesized ligands were structurally characterized by eleental analyses, and spectral studies including FTIR, UV-Vis, and single-crystal X-ray crystallographic meaurements.

    Three new mononuclear Cu(Ⅱ) Schiff base complexes were obtained from the direct reaction of the synthesized Schiff base ligands with copper acetate in a 1∶1 molar ratio in DMF-water (2∶1, V/V) medium. The synthesized complexes are green micro-crystalline solids, stable for prolonged periods, and insoluble in most organic solvents except DMSO. The complexes were comprehensively characterized and their structures were assessed from the results of elemental analyses, molar conductance measurements, FTIR, UV-Vis spectral, room temperature magnetic moment measurements, and density functional theory (DFT) studies. Single crystals of the complexes suitable for X-ray diffraction studies could not be obtained even after several attempts. The optimized structures of the complexes were ascertained by DFT studies.

    The measured molar conductances of 24.3, 30.5, and 22.5 S·cm2·mol-1 for complexes 1, 2, and 3 indicate their non-electrolytic nature.

    The FTIR spectra of free Schiff base ligands HL1 and HL2 showed a broad medium intensity band at ca. 3 424 cm-1 attributable to the O—H stretching mode of the phenolic —OH group. However, this absorption is absent in L3 due to the presence of the o-methoxy group as the substituent instead of the phenolic —OH group in the aromatic ring of the aldehyde. Strong absorption bands observed in 1 602-1 673 cm-1 are assigned to ν(C=N). The C=O stretching vibration of the ligands was observed in the region of 1 598-1 654 cm-1. The band that appeared at 1 162-1 231 cm-1 for HL1 and HL2 in the free ligands is attributed to C—O vibration[26]. Medium intensity band observed at ca. 1 170 cm-1 in all the ligands originated from N—N stretching vibration. Aromatic ring vibrations of the free ligands were observed as medium-intensity bands in the region of 800-500 cm-1. Coordination of azomethine moiety through the nitrogen atom of Schiff bases to the metal ion is expected to lower the C=N stretching frequency. On complexation, C=N vibration in the complexes shifted to a lower wavenumber of 1 602-1 673 cm-1 in comparison to the free ligands, confirming the participation of the azomethine group in coordination with the metal center through N-atom[27-28]. In addition, the participation of the phenolic —OH group in coordination with the metal center in complex 1 was ascertained from the shift of ν(C—O) (1 222 cm-1) to a lower wavenumber compared to the free ligand. The unaltered position of the free carbonyl group (—C=O) of the benzil moiety of the ligands suggests non-participation of the carbonyl group in coordination with the metal center.

    The above observations suggest that in complex 1 the ligand is coordinated to the metal center in a bidentate fashion through its phenolic oxygen and azomethine nitrogen atom. The square planer coordination environment around the metal center in complex 1 is attained through the bidentate coordination of two ligand moieties involving their imine nitrogen and phenolic oxygen atoms.

    In complexes 2 and 3 the Schiff base ligands HL2 and L3 are coordinated to the metal center in an unidentate fashion only involving their azomethine nitrogen atom. In HL2, the —OH group of the aldehyde moiety sterically is not in a favorable position to coordinate with the metal center and hence acts as a monodentate ligand. In the case of L3, the substituent —OCH3 moiety on the aldehyde ring does not participate in coordination rendering the ligand to coordinate only via azomethine nitrogen atom. The ν(C=N) (1 557-1 669 cm-1) in complexes 2 and 3 are lower in value than the free ligand as expected due to the coordination of azomethine moiety to the metal center. In complexes 2 and 3 the square planer coordination geometry is attained through the participation of two acetato ligands in coordination with the metal center in a monodentate manner. The use of cupric acetate as metal salt acted as the source of coordinated acetate ligands.

    The appearance of bands for complexes 2 and 3 in the region of 1 428-1 350 cm-1 and 1 557-1 604 cm-1 are attributable to symmetric and asymmetric stretching vibrations of the —COO group of acetato ligand. The difference (Δν) between νas(COO-) and νs(COO-) larger than 200 cm-1 in each case supports monodentate coordination of the acetate ligands[29].

    Furthermore, medium-intensity vibrations in the lower frequency region (ca. 500 cm-1) in the spectra of the complexes are assignable to metal-oxygen and metalnitrogen vibrations respectively.

    The electronic absorption spectra of the Schiff base ligands HL1, HL2, and L3 and their metal complexes (1, 2, and 3) under investigation were recorded in DMSO solution (10 µmol·L-1) (Fig.S3 and S4, Supporting information). Electronic spectra of the ligands HL1, HL2, and L3 show absorption bands at 280-300 nm and 330-343 nm. The spectral band at 280-300 nm is assignable to intraligand charge transfer (ILCT) transition and those observed at the region of 330-343 nm correspond to n-π* transition of azomethine group (— C=N)[30]. The high energy intraligand charge transfer and the n-π* transitions of the azomethine chromophore (—C=N) for the complexes, observed at 270-275 nm were shifted to a lower frequency. The lowering of frequency of the above transition indicates the involvement of the azomethine nitrogen atom in coordination with the Cu(Ⅱ) center[31].

    The room temperature magnetic moments of complexes 1, 2, and 3 were found to be 1.68 B.M., 1.63 B.M., and 1.64 B.M. respectively. The observed values for the complexes are close to the spin-only magnetic moments of the d9 system of Cu(Ⅱ) ion.

    The crystals of benzil monohydrazone-based Schiff bases were grown in a methanol solution and suitable crystals of HL1, HL2, and L3 were characterized structurally by single-crystal X-ray diffraction measurements. An ORTEP drawing of analyzed structures with an atom numbering scheme is illustrated in Fig. 1-3, respectively. Selected bond distances and angles for all structures are given in Table 2 whereas the details of the hydrogen bond contacts are listed in Table 3. The average bond length and bond angle parameters of phenyl rings are in the expected ranges. The data of crystallographic measurements demon-strates that HL1 and L3 crystallize in a monoclinic system with space groups P21/c and P21/n respectively while the HL2 crystallizes in the orthorhombic system with space groups Fdd2. The N—N (hydrazone) distances are in the range of typical N—N single bond distances of 0.140 39(12)-0.141 00(14) nm. The observed C—N double bonds in hydrazone units lie between 0.128 42(13) and 0.128 80(13) nm. The torsion angles involving the —N=C— units exhibit values in a range of 178.40(9)°-178.67(8)°. Generally, the geometrical parameters in the presented structures do not differ significantly from those previously reported in the literature[32-34]. The structure of HL1 is stabilized by a short intramolecular O2—H1…N2 hydrogen bond and weak C—H…O interactions, while in HL2, an intermolecular hydrogen bond of the type O—H···O exists. The crystal packing in L3 is only controlled by non-classical weak C—H···O interactions (Table 3, Fig.S5-S7).

    Figure 1

    Figure 1.  An ORTEP drawing of HL1 with the atom-numbering scheme

    Displacement ellipsoids are drawn at the 50% probability level.

    Figure 2

    Figure 2.  An ORTEP drawing of HL2 with the atom-numbering scheme

    Displacement ellipsoids are drawn at the 50% probability level.

    Figure 3

    Figure 3.  An ORTEP drawing of L3 with the atom-numbering scheme

    Displacement ellipsoids are drawn at the 50% probability level.

    Table 2

    Table 2.  Selected bond lengths (nm) and bond angles (°) of the complexes
    下载: 导出CSV
    Bond HL1 HL2 L3
    O1—C2 0.121 83(13) 0.122 48(18) 0.121 75(14)
    N1—N2 0.140 39(12) 0.140 98(17) 0.141 00(14)
    N1—C1 0.128 80(13) 0.128 8(2) 0.128 49(13)
    N2—C15 0.128 42(13) 0.128 0(2) 0.128 52(13)
    O2—C17(—C19) 0.135 36(12) 0.136 34(19) 0.136 37(14)
    N2—N1—C1 112.00(8) 110.82(13) 113.17(9)
    N1—N2—C15 114.24(8) 111.88(13) 109.43(9)
    N1—C1—C2 121.14(9) 119.44(13) 122.74(10)
    N1—C1—C9 119.93(9) 120.92(13) 118.16(10)
    N2—C15—C16 120.95(9) 121.86(13) 123.01(10)

    Table 3

    Table 3.  Hydrogen bonding parameters of the complexes
    下载: 导出CSV
    Compound D—H···A d(D—H)/nm d(H···A)/nm d(D···A)/nm ∠DHA/(°)
    HL1 O2—H1···N2 0.092 6(17) 0.176 1(17) 0.260 08(11) 149.3(15)
    C19—H19···O2 0.095 0.251 0.343 34(14) 164
    C20—H20···O2 0.095 0.245 0.329 54(13) 149
    HL2 O2—H1···O1 0.086(2) 0.195(2) 0.280 78(16) 175(2)
    C15—H15···O1 0.095 0.245 0.333 54(18) 155
    L3 C20—H20···O1 0.095 0.256 0.344 72(15) 156
    C22—H22B···O1 0.098 0.256 0.346 97(14) 154
    Symmetry codes: 1-x, -1/2+y, 1/2-z; x, -1/2-y, -1/2+z; -x, 1-y, z; -1/4-x, -1/4+y, 1/4+z; 1/2-x, -1/2+y, 1/2-z; 1-x, 1-y, 1-z.
    2.5.1   Electronic absorption titration

    The interaction between CT-DNA and metal complexes can be investigated by electronic absorption titration experiments[35]. When the complexes bind to DNA, a DNA-drug adduct ("drug"refers to the metal complexes) is formed in the ground state. Generally, a bathochromic shift along with a hypochromic effect is observed in such cases[34]. The possibility of complexes 1-3 binding to CT-DNA was investigated by absorption spectral studies. The absorption spectra for the interaction of a constant concentration of CT-DNA solution with different concentrations of complexes 1-3 were recorded and presented in Fig. 4. In the present case, a hyperchromic effect was noticed on the gradual addition of the complexes to CT-DNA solution. The changes as observed in the absorbance for the interaction of CT-DNA with complexes without any change in the location of the peak at 258 nm indicate that the synthesized complexes 1-3 bind with CT-DNA probably through electrostatic interaction, van der Walls force, and/or hydrogen bonding[36].

    Figure 4

    Figure 4.  Absorption spectra of CT-DNA (50 µmol·L-1) in the presence of increasing amounts of complexes 1, 2, and 3

    Benesi and Hildebrand′s method (Eq. 1) [37] was used in determining the apparent binding constant (Kapp) for the interaction of the complexes with CT-DNA.

    $ A_{\text {obs }}=(1-\alpha) c_0 \varepsilon_{\mathrm{DNA}} l+\alpha c_0 \varepsilon_{\mathrm{c}} l $

    (1)

    Here, Aobs is the observed absorbance of the solution, containing different concentrations of Cu(Ⅱ) complexes at 258 nm, α is the degree of association between CT-DNA and complex, εDNA and εc are the molar extinction coefficients at 258 nm for CT-DNA and the complex, respectively, l is the optical path length, and c0 is the initial concentration of CT-DNA. Eq. 1 can be expressed as follows:

    $ A_{\text {obs }}=(1-\alpha) A_0+\alpha A_{\mathrm{c}} $

    (2)

    where A0 and Ac are the absorbances of CT-DNA and the complexes at 258 nm at a concentration of c0. The parameter α is equated to Kappccomplex/(1+Kappccomplex). Eq.1 can be rearranged to[38]:

    $ 1 /\left(A_{\text {obs }}-A_0\right)=1 /\left(A_{\mathrm{c}}-A_0\right)+1 /\left[K_{\text {app }}\left(A_{\mathrm{c}}-A_0\right)\right] \times 1 / c_{\text {complex }} $

    (3)

    On increase of absorbance at 258 nm due to absorption of the DNA-drug complex, a linear relationship between the reciprocal concentration of the drug, 1/ccomplex vs the reciprocal of difference in concentration in the absence and presence of the drug, 1/(Aobs-A0) existed. From the above relationship, slope 1/[Kapp(Ac-A0)] and intercept 1/(Ac-A0) values were obtained (Fig. 5). The apparent binding constants (Kapp) are shown in Table 4. The Kapp values for the complexes are in the order of 103-104 L·mol-1, which is comparable to reported values for copper(Ⅱ) complexes[39]. The results of the studies suggest a moderate binding of complexes 1-3 to CT-DNA.

    Figure 5

    Figure 5.  Plots of 1/(Aobs-A0) vs 1/ccomplex for absorption spectrum titration of CT-DNA with complexes 1, 2, and 3

    Table 4

    Table 4.  Binding constants for complexes 1, 2 and 3
    下载: 导出CSV
    Complex Binding constant/(L·mol-1) R2
    1 1.27×104 0.929 66
    2 9.10×103 0.990 22
    3 1.51×104 0.929 66
    2.5.2   Competitive interaction with EB

    Fluorometric measurements utilizing EB as a fluorescent probe are generally undertaken to determine the binding nature of chemical species with target biomolecules such as DNA. The molecular fluorophore EB emits intense fluorescence emission when it binds to CT-DNA[40]. The changes in the emission intensity when it binds DNA are often employed to investigate the interaction between DNA and the metal complexes[41]. The enhanced emission intensity of EB-DNA may be quenched by the interaction of another chemical species that can bind with DNA by displacing EB probably via intercalative mode[42]. To determine the capability of the complexes to displace EB from its EB-bound DNA adduct, a competitive EB binding study was carried out with fluorescence spectral measurements[43]. The fluorescence spectra of EB-DNA adduct in the absence and presence of the complexes are shown in Fig. 6.

    Figure 6

    Figure 6.  (a) Emission spectra of DNA-EB system in the presence of increasing concentrations of complexes 1-3 along with the magnified images on the right; (b) Stern-Volmer plots of the fluorescence titration of 1-3

    Successive addition of increasing concentration of complexes 1-3 to DNA-EB adduct led to the quenching of the fluorescence emission intensity at 592 nm of the DNA-EB moiety. The observed emission spectra suggest that the copper(Ⅱ) complexes 1-3 compete with EB to bind with CT-DNA which resulted in quenching of fluorescence intensity. On increasing the concentration of complexes 1-3 gradually, the quenching of the fluorescence intensity of the EB-DNA complex suggests the displacement of EB from the CT-DNA-EB adduct. The observed changes in the fluorescence intensity are suggestive of a probable intercalating mode of interaction of complexes 1-3 with CT-DNA[44]. Fluorescence quenching of CT-DNA-EB adduct in the presence of the complex solution was further analyzed with the help of the Stern-Volmer equation:

    $ F_0 / F=K_{\mathrm{q}} c_{\mathrm{Q}}+1 $

    (4)

    where F and F0 are the emission intensity in the pres-ence and absence of a quencher, cQ is the concentration of the quencher and Kq is the Stern-Volmer quenching constant which can be obtained from the slope of the plot of F0/F vs cQ. The obtained values of Kq were of the order of 103 (Table 5), which are in good agreement with the results obtained from absorption spectral studies.

    Table 5

    Table 5.  Quenching constants of complexes 1-3
    下载: 导出CSV
    Complex Quenching constant/(L·mol-1) R2
    1 3.97×103 0.929 66
    2 3.50×103 0.990 22
    3 8.71×103 0.963 2

    The antibacterial activity data obtained in terms of zone of inhibition measurements are presented in Fig. 7. The synthesized Cu(Ⅱ) complexes were screened against Gram-negative bacteria including K. pneumoniae, E. coli, S. boydii, and Gram-positive S. aureus using disc diffusion method. The results obtained from the antibacterial screening suggest that complex 2 exhibited an appreciable activity. The zone of inhibition data showed that complex 2 was most active against K. pneumoniae, followed by S. boydii. However, complex 2 did not exhibit any antibacterial activity towards E. coli and gram-positive S. aureus. In the case of K. pneumoniae and S. boydii, the maximum inhibition was found in 100 µg per disc for both strains. Complex 2 probably binds with the cell membrane or DNA of the Gram-negative bacterial strains K. pneumoniae and S. boydii to arrest cell growth. Among the complexes studied, complexes 1 and 3 did not show any significant antibacterial activity against the bacterial strains under study.

    Figure 7

    Figure 7.  Histogram of zone diameter at different concentrations of complex 2 on strains K. pneumoniae (A), E. coli (I), S. aureus (J), and S. boydii (Q)

    Data are represented as mean±SD of three concentrations in three different experiments; *P < 0.05, **P < 0.01, ***P < 0.001, ns: no significance, P > 0.05.

    In the absence of suitable single crystals, X-ray diffraction studies for structural analysis of the complexes could not be done. The optimized structures of the complexes were ascertained based on DFT studies and are shown in Fig. 8. The calculated bond distances and angles for the complexes are presented in Table S1. Theoretical study reveals that complex 1 is mononuclear and possesses a distorted square planar geometry where the Cu(Ⅱ) center is coordinated by two imine nitrogen and two oxygen atoms from two ligand moieties. The calculated Cu1—N1, Cu1—N1#, Cu1—O1, and Cu1—O1# bond lengths were found to be 0.204 693, 0.201 975, 0.203 000, and 0.190 478 nm. The determined O1 —Cu1—N1#, N1 —Cu1—O1, N1—Cu1—O1#, and N1# —Cu1—O1# bond angles are 92.878 37°, 91.208 10°, 91.360 78°, and 91.401 83° respectively.

    Figure 8

    Figure 8.  Geometry-optimized structures of complexes 1-3

    In complex 2 the mononuclear Cu(Ⅱ) center is coordinated by two imine nitrogen (N1 and N1#) of two HL2 ligands and oxygen atoms (O1 and O1#) from two acetate ligands resulting in a square planar coordination polyhedra around the metal center. The Cu1—N1, Cu1—N1#, Cu1—O1, and Cu1—O1# optimized bond lengths were found to be ca. 0.206 383, 0.212 627, 0.191 620, and 0.194 152 nm respectively. The optimized O1—Cu1—N1#, N1—Cu1—O1, N1—Cu1— O1# and N1#—Cu1—O1# bond angles are 97.179 06°, 88.345 37°, 87.956 52°, and 85.580 85° respectively.

    Complex 3 also contains a Cu(Ⅱ) mononuclear unit coordinated by two imine nitrogen (N1 and N1#) of two L3 ligand moieties and oxygen atoms (O1 and O1#) from two acetato ligands forming a square planar geometry around the Cu(Ⅱ) center. The Cu1—N1, Cu1— N1#, Cu1—O1, and Cu1—O1# optimized bond lengths are ca. 0.210 451, 0.208 506, 0.194 281, and 0.199 474 nm respectively, and the calculated O1— Cu1—N1#, N1— Cu1— O1, N1 —Cu1—O1#, and N1# —Cu1—O1# bond angles are 92.895 09°, 92.841 67°, 87.242 98°, and 89.350 90° respectively. The deviation of metal-ligand bond angles from the ideal value of a square planar geometry for the complexes suggests distorted square planar structures for the complexes reported herein.

    The results of elemental analyses and spectroscopic measurements are also in good agreement with the DFT-calculated optimized structures of the complexes.

    To summarize it may be inferred that, three new mononuclear Cu(Ⅱ) complexes, [Cu(L1)2] (1), [Cu(HL2)2 (Ac) 2] (2), and [Cu(L3)2 (Ac)2] (3) have been synthesized with hydrazone based Schiff base ligands HL1, HL2, and L3 derived from the condensation of benzil monohy-drazone and aldehydes, viz. salicylaldehyde, 4-hydroxy benzaldehyde, and o-anisaldehyde. Characterization methods including FTIR, UV-Vis, 1H NMR, elemental analyses, and molar conductance measurements were used in the comprehensive characterization of the ligand and complexes. In addition to spectral character-ization, ligands were also structurally characterized by single-crystal X-ray diffraction studies.

    In complex 1, Schiff base (HL1) is coordinated to the metal center in a bidentate fashion involving azomethine nitrogen and phenolic oxygen atoms, whereas in complex 2 and 3 Schiff base ligands HL2, and L3 are coordinated in a monodentate manner through their imine nitrogen. The coordination polyhedra in complexes 2 and 3 were completed by the coordination of two unidentate acetato ligands. Biological relevance, viz. the DNA binding ability of the synthesized complexes was evaluated by spectroscopic methods. Absorption and emission spectral studies suggest moderately strong interaction of complexes 1, 2, and 3 with CT-DNA. Emission spectral study suggests the partial displacement of EB from CT-DNA-EB adduct and a proba-ble intercalative mode of binding of complexes to CT-DNA. Results of antibacterial screening indicate that complex 2 exhibits an appreciable antibacterial activity against the pathogenic bacterial strains screened.

    Supporting information is available at http://www.wjhxxb.cn


    Acknowledgments: Dutta Purkayastha R. N., Bhattacharjee Maitri, and Boruah Smriti Rekha are thankful to the authority of Tripura University, Suryamaninagar, for providing an infrastructure facility. Bhattacharjee Maitri and Boruah Smriti Rekha are thankful to Tripura University for providing a university fellowship.
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  • Figure 1  An ORTEP drawing of HL1 with the atom-numbering scheme

    Displacement ellipsoids are drawn at the 50% probability level.

    Figure 2  An ORTEP drawing of HL2 with the atom-numbering scheme

    Displacement ellipsoids are drawn at the 50% probability level.

    Figure 3  An ORTEP drawing of L3 with the atom-numbering scheme

    Displacement ellipsoids are drawn at the 50% probability level.

    Figure 4  Absorption spectra of CT-DNA (50 µmol·L-1) in the presence of increasing amounts of complexes 1, 2, and 3

    Figure 5  Plots of 1/(Aobs-A0) vs 1/ccomplex for absorption spectrum titration of CT-DNA with complexes 1, 2, and 3

    Figure 6  (a) Emission spectra of DNA-EB system in the presence of increasing concentrations of complexes 1-3 along with the magnified images on the right; (b) Stern-Volmer plots of the fluorescence titration of 1-3

    Figure 7  Histogram of zone diameter at different concentrations of complex 2 on strains K. pneumoniae (A), E. coli (I), S. aureus (J), and S. boydii (Q)

    Data are represented as mean±SD of three concentrations in three different experiments; *P < 0.05, **P < 0.01, ***P < 0.001, ns: no significance, P > 0.05.

    Figure 8  Geometry-optimized structures of complexes 1-3

    Table 1.  Crystal data and structure refinement parameters for the ligands

    Parameter HL1 HL2 L3
    Empirical formula C21H16N2O2 C21H16N2O2 C22H18N2O2
    Formula weight 328.36 328.36 342.38
    Crystal system Monoclinic Orthorhombic Monoclinic
    Space group P21/c Fdd2 P21/n
    a/nm 1.688 86(8) 3.028 83(4) 1.546 51(3)
    b/nm 0.909 79(3) 2.761 76(9) 0.782 50(1)
    c/nm 1.107 49(3) 0.803 612(18) 1.585 04(3)
    β/(°) 99.377(3) 114.056(2)
    Volume/nm3 1.971 55(7) 6.722 1(3) 1.75153(6)
    Z 4 16 4
    Dc/(Mg·m-3) 1.299 1.298 1.298
    Absorption coefficient/mm-1 0.680 0.679 0.084
    F(000) 688 2 752 720
    Crystal size/mm 0.09×0.43×0.52 0.60×0.50×0.46 0.52×0.55×0.55
    θ range for data collection/(°) 2.7-66.6 4.3-66.6 2.8-25.0
    Index ranges -20 ≤ h ≤ 20; -36 ≤ h ≤ 30; -18 ≤ h ≤ 18;
    -10 ≤ k ≤ 10; -32 ≤ k ≤ 32; -9 ≤ k ≤ 9;
    -13 ≤ l ≤ 13 -9 ≤ l ≤ 9 -18 ≤ l ≤ 18
    Reflection collected 59 891 40 530 45 286
    Independent reflection 2 961 2 962 2 978
    Goodness of fit on F2 1.05 1.09 1.06
    R indices (all data) 0.030 8 0.021 3 0.029 2
    Largest diff. peak and hole/(e·nm-3) 190 and -140 130 and -120 220 and -150
    下载: 导出CSV

    Table 2.  Selected bond lengths (nm) and bond angles (°) of the complexes

    Bond HL1 HL2 L3
    O1—C2 0.121 83(13) 0.122 48(18) 0.121 75(14)
    N1—N2 0.140 39(12) 0.140 98(17) 0.141 00(14)
    N1—C1 0.128 80(13) 0.128 8(2) 0.128 49(13)
    N2—C15 0.128 42(13) 0.128 0(2) 0.128 52(13)
    O2—C17(—C19) 0.135 36(12) 0.136 34(19) 0.136 37(14)
    N2—N1—C1 112.00(8) 110.82(13) 113.17(9)
    N1—N2—C15 114.24(8) 111.88(13) 109.43(9)
    N1—C1—C2 121.14(9) 119.44(13) 122.74(10)
    N1—C1—C9 119.93(9) 120.92(13) 118.16(10)
    N2—C15—C16 120.95(9) 121.86(13) 123.01(10)
    下载: 导出CSV

    Table 3.  Hydrogen bonding parameters of the complexes

    Compound D—H···A d(D—H)/nm d(H···A)/nm d(D···A)/nm ∠DHA/(°)
    HL1 O2—H1···N2 0.092 6(17) 0.176 1(17) 0.260 08(11) 149.3(15)
    C19—H19···O2 0.095 0.251 0.343 34(14) 164
    C20—H20···O2 0.095 0.245 0.329 54(13) 149
    HL2 O2—H1···O1 0.086(2) 0.195(2) 0.280 78(16) 175(2)
    C15—H15···O1 0.095 0.245 0.333 54(18) 155
    L3 C20—H20···O1 0.095 0.256 0.344 72(15) 156
    C22—H22B···O1 0.098 0.256 0.346 97(14) 154
    Symmetry codes: 1-x, -1/2+y, 1/2-z; x, -1/2-y, -1/2+z; -x, 1-y, z; -1/4-x, -1/4+y, 1/4+z; 1/2-x, -1/2+y, 1/2-z; 1-x, 1-y, 1-z.
    下载: 导出CSV

    Table 4.  Binding constants for complexes 1, 2 and 3

    Complex Binding constant/(L·mol-1) R2
    1 1.27×104 0.929 66
    2 9.10×103 0.990 22
    3 1.51×104 0.929 66
    下载: 导出CSV

    Table 5.  Quenching constants of complexes 1-3

    Complex Quenching constant/(L·mol-1) R2
    1 3.97×103 0.929 66
    2 3.50×103 0.990 22
    3 8.71×103 0.963 2
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    沈阳化工大学材料科学与工程学院 沈阳 110142

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