Strategic design of lysine-targeted irreversible covalent NDM-1 inhibitors
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* Corresponding author.
E-mail address: sunxunf@shmu.edu.c (X. Sun).
Citation: Youzhen Ma, Yongxi Liang, Menglu Guo, Delin Min, Lulu Zheng, Yun Tang, Xun Sun. Strategic design of lysine-targeted irreversible covalent NDM-1 inhibitors[J]. Chinese Chemical Letters, ;2023, 34(7): 108072. doi: 10.1016/j.cclet.2022.108072
L. Dortet, L. Poirel, P. Nordmann, BioMed. Res. Int. 2014 (2014) 249856.
N. Guo, Y. Xia, Y. Duan, et al., Chin. Chem. Lett. 34 (2023) 107542.
doi: 10.1016/j.cclet.2022.05.056
J. Berkhout, M.J. Melchers, A.C. van Mil, et al., Antimicrob. Agents Chemother. 59 (2015) 2299–2304.
doi: 10.1128/AAC.04627-14
S.J. Hecker, K.R. Reddy, M. Totrov, et al., J. Med. Chem. 58 (2015) 3682–3692.
doi: 10.1021/acs.jmedchem.5b00127
D.T. King, L.J. Worrall, R. Gruninger, N.C. Strynadka, J. Am. Chem. Soc. 134 (2012) 11362–11365.
doi: 10.1021/ja303579d
J. Brem, R. Cain, S. Cahill, et al., Nat. Commun. 7 (2016) 12406.
doi: 10.1038/ncomms12406
G. Bahr, L.J. Gonzalez, A.J. Vila, Chem. Rev. 121 (2021) 7957–8094.
doi: 10.1021/acs.chemrev.1c00138
J. Chiou, T.Y. Leung, S. Chen, Antimicrob. Agents Chemother. 58 (2014) 5372–5378.
doi: 10.1128/AAC.01977-13
P.W. Thomas, M. Cammarata, J.S. Brodbelt, W. Fast, ChemBioChem 15 (2014) 2541–2548.
doi: 10.1002/cbic.201402268
P.W. Thomas, M. Cammarata, J.S. Brodbelt, et al., Biochemistry 58 (2019) 2834–2843.
doi: 10.1021/acs.biochem.9b00393
H. Kurosaki, Y. Yamaguchi, T. Higashi, et al., Angew. Chem. Int. Ed. 44 (2005) 3861–3864.
doi: 10.1002/anie.200500835
J. Chiou, S. Wan, K.F. Chan, et al., Chem. Commun. 51 (2015) 9543–9546.
doi: 10.1039/C5CC02594J
P.W. Thomas, T. Spicer, M. Cammarata, et al., Bioorg. Med. Chem. 21 (2013) 3138–3146.
doi: 10.1016/j.bmc.2013.03.031
C. Chen, K.W. Yang, L.Y. Wu, J.Q. Li, L.Y. Sun, Chem. Commun. 56 (2020) 2755–2758.
doi: 10.1039/C9CC09074F
D. Buttner, J.S. Kramer, F.M. Klingler, et al., ACS Infect. Dis. 4 (2018) 360–372.
doi: 10.1021/acsinfecdis.7b00129
P. Linciano, L. Cendron, E. Gianquinto, F. Spyrakis, D. Tondi, ACS Infect. Dis. 5 (2019) 9–34.
doi: 10.1021/acsinfecdis.8b00247
H. Xie, J. Mire, Y. Kong, et al., Nat. Chem. 4 (2012) 802–809.
doi: 10.1038/nchem.1435
W. Gao, B. Xing, R.Y. Tsien, J. RaoNovel, J. Am. Chem. Soc. 125 (2003) 11146–11147.
doi: 10.1021/ja036126o
S.S. van Berkel, J. Brem, A.M. Rydzik, et al., J. Med. Chem. 56 (2013) 6945–6953.
doi: 10.1021/jm400769b
L. Gambini, C. Baggio, P. Udompholkul, et al., J. Med. Chem. 62 (2019) 5616–5627.
doi: 10.1021/acs.jmedchem.9b00561
D.N. Heller, D.A. Kaplan, N.G. Rummel, J. von Bredow, J. Agric. Food Chem. 48 (2000) 6030–6035.
doi: 10.1021/jf000046b
M. Kurogochi, S. Nishimura, Y.C. Lee, J. Biol. Chem. 279 (2004) 44704–44712.
doi: 10.1074/jbc.M401718200
X. Li, H. Yang, Y. Teng, et al., Chin. Chem. Lett. 33 (2022) 4223–4228.
doi: 10.1016/j.cclet.2022.03.008
C. Chen, Y. Xiang, K.W. Yang, et al., Chem. Commun. 54 (2018) 4802–4805.
doi: 10.1039/C8CC01067F
M.R. Mehaffey, Y.C. Ahn, D.D. Rivera, et al., Chem. Sci. 11 (2020) 8999–9010.
doi: 10.1039/D0SC02503H
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